RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Taf4bG5E8Z2 855 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rcn1Q05186 325 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Brd9Q3UQU0 596 aaKnown RBP17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Vwa3aQ3UVV9 1148 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Orc2Q60862 576 aaKnown RBP17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Fam47eD3YWC7 402 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 TdgP56581 421 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 VegfaQ00731 214 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tgfbrap1Q3UR70 860 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 E2f8Q58FA4 860 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Taok1Q5F2E8 1001 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 PhkbQ7TSH2 1085 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tesk2Q8VCT9 570 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rpa1Q8VEE4 623 aaKnown RBP17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Astn1Q61137 1302 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Casq2O09161 415 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ets2P15037 468 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Phc1Q64028 1012 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tdpoz4Q6YCH2 370 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ints8Q80V86 995 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pih1h3bQ8C6P5 218 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tbc1d10cQ8C9V1 444 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 NptxrQ99J85 493 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ttc5Q99LG4 440 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Mzf1S4R1L6 814 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Plxnb2B2RXS4 1842 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Lrrc74aA0A1Y7VMD6 494 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Vmn2r15L7N2A0 855 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 FosP01101 380 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cyp11b1Q3TG86 501 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rsad1Q5SUV1 442 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Sema5aQ62217 1077 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Fmnl3Q6ZPF4 1028 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 YwhabQ9CQV8 246 aaKnown RBP17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Med10Q9CXU0 135 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Llcfc1Q9D9P8 108 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gtf2h1Q9DBA9 547 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tlr5Q9JLF7 859 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 SmapQ9R0P4 181 aaKnown RBP17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Lrrc38A2VDH3 298 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Slc27a2O35488 620 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Casp14O89094 257 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rab21P35282 222 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Fmr1P35922 614 aaKnown RBP17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Slc10a5Q5PT54 434 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tcf4Q60722 670 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 AlcamQ61490 583 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 AgpsQ8C0I1 645 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gmcl1Q920G9 524 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Prl2b1Q9DAZ2 228 aa17.27■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rps6P62754 249 aaKnown RBP17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Runx2Q08775 607 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Prom2Q3UUY6 835 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ccdc117Q6PB51 277 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Cd2bp2Q9CWK3 342 aaKnown RBP17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Extl2Q9ES89 330 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Olfr310B2RVZ1 332 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Tspyl1O88852 379 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Sem1P60897 70 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Trim43cP86449 446 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Aars2Q14CH7 980 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gprin1Q3UNH4 932 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Kcnv2Q8CFS6 562 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Atp2a1Q8R429 994 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Wrap53Q8VC51 532 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 NelfcdQ922L6 591 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Cdk9Q99J95 372 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Tmed2Q9R0Q3 201 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Klrc2Q9WTJ9 238 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Sucla2Q9Z2I9 463 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Kcnk16G5E845 292 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gm3182K7N6T8 263 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pdha1P35486 390 aaKnown RBP17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ect2Q07139 913 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pid1Q3UBG2 217 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Slc10a4Q3UEZ8 437 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Styk1Q6J9G1 429 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Retreg2Q6NS82 541 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ergic2Q9CR89 377 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Nsmce1Q9D720 266 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Sapcd2Q9D818 391 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Xab2Q9DCD2 855 aaKnown RBP17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pard6bQ9JK83 371 aa17.26■□□□□ 0.35
Trim28-201ENSMUST00000005705 Rad51bO35719 350 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Nptx2O70340 429 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ctnnal1O88327 731 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Adgrg6Q6F3F9 1165 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Mcph1Q7TT79 822 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ankzf1Q80UU1 748 aaKnown RBP17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pdzph1Q8BGR1 1238 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Adgra1Q8C4G9 578 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Adamts2Q8C9W3 1213 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Olfr1499Q8VG65 314 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Spdl1Q923A2 608 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Lpin3Q99PI4 848 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Asb11Q9CQ31 323 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Iqcf1Q9D9K8 182 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 IkbipQ9DBZ1 373 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Syngap1F6SEU4 1340 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Rbp3P49194 1234 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms