RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W KIN28P06242 306 aa2.01□□□□□ -2.09
SEC16YPL085W RPL1AP0CX43 217 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W RPL1BP0CX44 217 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W RPB8P20436 146 aa2.01□□□□□ -2.09
SEC16YPL085W DEG1P31115 442 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W YAR029WP39549 74 aa2.01□□□□□ -2.09
SEC16YPL085W PIC2P40035 300 aa2.01□□□□□ -2.09
SEC16YPL085W CYB5P40312 120 aa2.01□□□□□ -2.09
SEC16YPL085W OGG1P53397 376 aaPredicted RBP2.01□□□□□ -2.09
SEC16YPL085W NUP49Q02199 472 aa2.01□□□□□ -2.09
SEC16YPL085W NGL1Q08213 363 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W MSN1P22148 382 aa2.01□□□□□ -2.09
SEC16YPL085W LAC1P28496 418 aa2.01□□□□□ -2.09
SEC16YPL085W YFL054CP43549 646 aa2.01□□□□□ -2.09
SEC16YPL085W NIS1P53939 407 aa2.01□□□□□ -2.09
SEC16YPL085W ERI1P62651 68 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W RCE1Q03530 315 aa2.01□□□□□ -2.09
SEC16YPL085W SMP3Q04174 516 aa2.01□□□□□ -2.09
SEC16YPL085W RRS1Q08746 203 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W RAX1Q08760 435 aa2.01□□□□□ -2.09
SEC16YPL085W YBR085C-AO43137 85 aa2.01□□□□□ -2.09
SEC16YPL085W SOD2P00447 233 aa2.01□□□□□ -2.09
SEC16YPL085W DAL82P21705 255 aa2.01□□□□□ -2.09
SEC16YPL085W MRPL4P36517 319 aa2.01□□□□□ -2.09
SEC16YPL085W RPB11P38902 120 aa2.01□□□□□ -2.09
SEC16YPL085W YCK3P39962 524 aa2.01□□□□□ -2.09
SEC16YPL085W MOB2P43563 287 aa2.01□□□□□ -2.09
SEC16YPL085W POP6P53218 158 aa2.01□□□□□ -2.09
SEC16YPL085W GOT1Q03554 138 aa2.01□□□□□ -2.09
SEC16YPL085W CGI121Q03705 181 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W YET2Q04210 160 aa2.01□□□□□ -2.09
SEC16YPL085W GPI11Q06636 219 aa2.01□□□□□ -2.09
SEC16YPL085W YLR125WQ12138 136 aa2.01□□□□□ -2.09
SEC16YPL085W RPL24AP04449 155 aaKnown RBP2.01□□□□□ -2.09
SEC16YPL085W CDC9P04819 755 aa2.01□□□□□ -2.09
SEC16YPL085W YBR285WP38354 144 aa2.01□□□□□ -2.09
SEC16YPL085W GRE3P38715 327 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SEC16YPL085W AVT6P40074 448 aa2.01□□□□□ -2.09
SEC16YPL085W ZIM17P42844 174 aa2.01□□□□□ -2.09
SEC16YPL085W DIE2P50076 525 aa2.01□□□□□ -2.09
SEC16YPL085W BIO3P50277 480 aa2.01□□□□□ -2.09
SEC16YPL085W PMT5P52867 743 aa2.01□□□□□ -2.09
SEC16YPL085W AQR1P53943 586 aa2.01□□□□□ -2.09
SEC16YPL085W ARL3Q02804 198 aa2.01□□□□□ -2.09
SEC16YPL085W RUB1Q03919 77 aa2.01□□□□□ -2.09
SEC16YPL085W EMI1Q04406 187 aa2.01□□□□□ -2.09
SEC16YPL085W RPL4AP10664 362 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W PHO85P17157 305 aa2□□□□□ -2.09
SEC16YPL085W OLE1P21147 510 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W ATG22P25568 528 aa2□□□□□ -2.09
SEC16YPL085W CLB6P32943 380 aa2□□□□□ -2.09
SEC16YPL085W GCS1P35197 352 aa2□□□□□ -2.09
SEC16YPL085W KAE1P36132 386 aa2□□□□□ -2.09
SEC16YPL085W SEA4P38164 1038 aa2□□□□□ -2.09
SEC16YPL085W YMR262WP38430 313 aa2□□□□□ -2.09
SEC16YPL085W ARO9P38840 513 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W IKI1P38874 309 aa2□□□□□ -2.09
SEC16YPL085W PSD1P39006 500 aa2□□□□□ -2.09
SEC16YPL085W YIL086CP40503 102 aa2□□□□□ -2.09
SEC16YPL085W RPL4BP49626 362 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W ELA1P53861 379 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W CTF19Q02732 369 aa2□□□□□ -2.09
SEC16YPL085W YLR456WQ06199 204 aa2□□□□□ -2.09
SEC16YPL085W HEM4P06174 275 aa2□□□□□ -2.09
SEC16YPL085W YOL162WP0CF19 215 aa2□□□□□ -2.09
SEC16YPL085W YER010CP40011 234 aa2□□□□□ -2.09
SEC16YPL085W BUD8P41698 603 aa2□□□□□ -2.09
SEC16YPL085W AIM24P47127 394 aa2□□□□□ -2.09
SEC16YPL085W YIP5P53108 310 aa2□□□□□ -2.09
SEC16YPL085W SUR7P54003 302 aa2□□□□□ -2.09
SEC16YPL085W OST6Q03723 332 aa2□□□□□ -2.09
SEC16YPL085W YML053CQ04978 212 aa2□□□□□ -2.09
SEC16YPL085W CNL1Q06333 122 aa2□□□□□ -2.09
SEC16YPL085W VPS36Q06696 566 aa2□□□□□ -2.09
SEC16YPL085W LOT6Q07923 191 aa2□□□□□ -2.09
SEC16YPL085W SPC3Q12133 184 aa2□□□□□ -2.09
SEC16YPL085W YGR161W-CQ3E744 92 aa2□□□□□ -2.09
SEC16YPL085W DFG16Q99234 619 aa2□□□□□ -2.09
SEC16YPL085W MET17P06106 444 aa2□□□□□ -2.09
SEC16YPL085W SIR2P06700 562 aa2□□□□□ -2.09
SEC16YPL085W RPS18AP0CX55 146 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W RPS18BP0CX56 146 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W PET9P18239 318 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W STE4P18851 423 aa2□□□□□ -2.09
SEC16YPL085W HMX1P32339 317 aa2□□□□□ -2.09
SEC16YPL085W SDS24P38314 527 aa2□□□□□ -2.09
SEC16YPL085W JHD2P47156 728 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W RIB4P50861 169 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W PNC1P53184 216 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W GPI15P53961 229 aa2□□□□□ -2.09
SEC16YPL085W PNG1Q02890 363 aa2□□□□□ -2.09
SEC16YPL085W CAB5Q03941 241 aa2□□□□□ -2.09
SEC16YPL085W CDD1Q06549 142 aa2□□□□□ -2.09
SEC16YPL085W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SEC16YPL085W CCW14O13547 238 aa2□□□□□ -2.09
SEC16YPL085W SPS2P08459 502 aa2□□□□□ -2.09
SEC16YPL085W HSP26P15992 214 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SEC16YPL085W MRP20P32387 263 aa2□□□□□ -2.09
SEC16YPL085W YEF1P32622 495 aa2□□□□□ -2.09
SEC16YPL085W SOH1P38633 127 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms