RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W YJR096WP47137 282 aa5.69□□□□□ -1.5
CTF19YPL018W CCC1P47818 322 aa5.69□□□□□ -1.5
CTF19YPL018W RMD9P53140 646 aaKnown RBP5.69□□□□□ -1.5
CTF19YPL018W AIM36Q03798 255 aa5.69□□□□□ -1.5
CTF19YPL018W SSK1Q07084 712 aa5.69□□□□□ -1.5
CTF19YPL018W RRI1Q12468 440 aa5.69□□□□□ -1.5
CTF19YPL018W DCP1Q12517 231 aaPredicted RBP5.69□□□□□ -1.5
CTF19YPL018W PDE2P06776 526 aa5.68□□□□□ -1.5
CTF19YPL018W CKA1P15790 372 aa5.68□□□□□ -1.5
CTF19YPL018W SHE2P36068 246 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
CTF19YPL018W YJL218WP40892 196 aaKnown RBP5.68□□□□□ -1.5
CTF19YPL018W GDS1P41913 522 aa5.68□□□□□ -1.5
CTF19YPL018W PMT6P42934 759 aa5.68□□□□□ -1.5
CTF19YPL018W CGR1P53188 120 aa5.68□□□□□ -1.5
CTF19YPL018W CPR8P53728 308 aa5.68□□□□□ -1.5
CTF19YPL018W EOS1P53938 366 aa5.68□□□□□ -1.5
CTF19YPL018W SSY1Q03770 852 aa5.68□□□□□ -1.5
CTF19YPL018W YAP6Q03935 383 aa5.68□□□□□ -1.5
CTF19YPL018W RAF1Q06891 181 aa5.68□□□□□ -1.5
CTF19YPL018W LUC7Q07508 261 aaPredicted RBP5.68□□□□□ -1.5
CTF19YPL018W MCH4Q08268 501 aa5.68□□□□□ -1.5
CTF19YPL018W RPN13O13563 156 aa5.67□□□□□ -1.5
CTF19YPL018W SOD2P00447 233 aa5.67□□□□□ -1.5
CTF19YPL018W GCN4P03069 281 aa5.67□□□□□ -1.5
CTF19YPL018W SCEIP03882 235 aa5.67□□□□□ -1.5
CTF19YPL018W MRP1P10662 321 aaKnown RBP5.67□□□□□ -1.5
CTF19YPL018W DBF2P22204 572 aa5.67□□□□□ -1.5
CTF19YPL018W DBP2P24783 546 aaKnown RBP5.67□□□□□ -1.5
CTF19YPL018W HMX1P32339 317 aa5.67□□□□□ -1.5
CTF19YPL018W ERG3P32353 365 aa5.67□□□□□ -1.5
CTF19YPL018W PAU2P32612 120 aa5.67□□□□□ -1.5
CTF19YPL018W YBR137WP38276 179 aa5.67□□□□□ -1.5
CTF19YPL018W MTC6P38849 526 aa5.67□□□□□ -1.5
CTF19YPL018W PTH1P38876 190 aaKnown RBP5.67□□□□□ -1.5
CTF19YPL018W IDP2P41939 412 aa5.67□□□□□ -1.5
CTF19YPL018W SLS1P42900 643 aa5.67□□□□□ -1.5
CTF19YPL018W PMT5P52867 743 aa5.67□□□□□ -1.5
CTF19YPL018W IMO32P53219 342 aa5.67□□□□□ -1.5
CTF19YPL018W YGR054WP53235 642 aaKnown RBP5.67□□□□□ -1.5
CTF19YPL018W MTM1P53320 366 aa5.67□□□□□ -1.5
CTF19YPL018W MKC7P53379 596 aa5.67□□□□□ -1.5
CTF19YPL018W RSM28Q03430 361 aa5.67□□□□□ -1.5
CTF19YPL018W TDA1Q03533 586 aa5.67□□□□□ -1.5
CTF19YPL018W YDR387CQ04162 555 aa5.67□□□□□ -1.5
CTF19YPL018W HLR1Q04429 423 aa5.67□□□□□ -1.5
CTF19YPL018W NMA1Q06178 401 aaKnown RBP5.67□□□□□ -1.5
CTF19YPL018W PEX27Q08580 376 aa5.67□□□□□ -1.5
CTF19YPL018W TIR4Q12218 487 aaPredicted RBP5.67□□□□□ -1.5
CTF19YPL018W FOL3Q12676 427 aaPredicted RBP5.67□□□□□ -1.5
CTF19YPL018W SUS1Q6WNK7 96 aa5.67□□□□□ -1.5
CTF19YPL018W GLT1Q12680 2145 aaKnown RBP5.66□□□□□ -1.5
CTF19YPL018W HEM4P06174 275 aa5.66□□□□□ -1.5
CTF19YPL018W ADK1P07170 222 aaKnown RBP5.66□□□□□ -1.5
CTF19YPL018W COX9P07255 59 aa5.66□□□□□ -1.5
CTF19YPL018W RPS18AP0CX55 146 aaKnown RBP5.66□□□□□ -1.5
CTF19YPL018W RPS18BP0CX56 146 aaPredicted RBP5.66□□□□□ -1.5
CTF19YPL018W PCL1P24867 279 aa5.66□□□□□ -1.5
CTF19YPL018W ERG4P25340 473 aa5.66□□□□□ -1.5
CTF19YPL018W DAL3P32459 195 aa5.66□□□□□ -1.5
CTF19YPL018W FRM2P37261 193 aa5.66□□□□□ -1.5
CTF19YPL018W ALG14P38242 237 aa5.66□□□□□ -1.5
CTF19YPL018W ATF1P40353 525 aa5.66□□□□□ -1.5
CTF19YPL018W DLS1P40366 167 aa5.66□□□□□ -1.5
CTF19YPL018W ATG18P43601 500 aa5.66□□□□□ -1.5
CTF19YPL018W UBX6P47049 396 aa5.66□□□□□ -1.5
CTF19YPL018W LOH1P47055 219 aa5.66□□□□□ -1.5
CTF19YPL018W YJL016WP47072 561 aa5.66□□□□□ -1.5
CTF19YPL018W PXR1P53335 271 aaPredicted RBP5.66□□□□□ -1.5
CTF19YPL018W SAM50P53969 484 aa5.66□□□□□ -1.5
CTF19YPL018W YLR152CP54072 576 aa5.66□□□□□ -1.5
CTF19YPL018W DIG2Q03373 323 aaKnown RBP5.66□□□□□ -1.5
CTF19YPL018W CRR1Q05790 422 aa5.66□□□□□ -1.5
CTF19YPL018W ASR1Q06834 288 aa5.66□□□□□ -1.5
CTF19YPL018W MSH5Q12175 901 aa5.66□□□□□ -1.5
CTF19YPL018W MCT1Q12283 360 aa5.66□□□□□ -1.5
CTF19YPL018W COX5BP00425 151 aa5.65□□□□□ -1.5
CTF19YPL018W CDC36P06100 191 aaPredicted RBP5.65□□□□□ -1.5
CTF19YPL018W PET494P07390 489 aaPredicted RBP5.65□□□□□ -1.5
CTF19YPL018W RPL35AP0CX84 120 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W RPL35BP0CX85 120 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W MAK32P23060 363 aa5.65□□□□□ -1.5
CTF19YPL018W TMA19P35691 167 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W SFK1P35735 353 aa5.65□□□□□ -1.5
CTF19YPL018W RCN1P36054 211 aa5.65□□□□□ -1.5
CTF19YPL018W SDS24P38314 527 aa5.65□□□□□ -1.5
CTF19YPL018W YMR262WP38430 313 aa5.65□□□□□ -1.5
CTF19YPL018W GZF3P42944 551 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W LYS20P48570 428 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W RAI1P53063 387 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W DOC1P53068 250 aa5.65□□□□□ -1.5
CTF19YPL018W YGL204CP53089 101 aa5.65□□□□□ -1.5
CTF19YPL018W PCP1P53259 346 aa5.65□□□□□ -1.5
CTF19YPL018W NRK1P53915 240 aa5.65□□□□□ -1.5
CTF19YPL018W RCE1Q03530 315 aa5.65□□□□□ -1.5
CTF19YPL018W THI72Q08579 599 aa5.65□□□□□ -1.5
CTF19YPL018W LYS21Q12122 440 aaKnown RBP5.65□□□□□ -1.5
CTF19YPL018W HIS3P06633 220 aa5.64□□□□□ -1.51
CTF19YPL018W NAM2P11325 894 aa5.64□□□□□ -1.51
CTF19YPL018W HOM6P31116 359 aaKnown RBP5.64□□□□□ -1.51
CTF19YPL018W MIA40P36046 403 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms