RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W ATS1P31386 333 aa3.61□□□□□ -1.83
CHL1YPL008W NSG1P38837 291 aa3.61□□□□□ -1.83
CHL1YPL008W YJL193WP39542 402 aa3.61□□□□□ -1.83
CHL1YPL008W SLZ1P40167 298 aa3.61□□□□□ -1.83
CHL1YPL008W RFC4P40339 323 aaKnown RBP3.61□□□□□ -1.83
CHL1YPL008W SYS1P41544 203 aa3.61□□□□□ -1.83
CHL1YPL008W DOC1P53068 250 aa3.61□□□□□ -1.83
CHL1YPL008W SUN4P53616 420 aa3.61□□□□□ -1.83
CHL1YPL008W YML053CQ04978 212 aa3.61□□□□□ -1.83
CHL1YPL008W CYK3Q07533 885 aa3.61□□□□□ -1.83
CHL1YPL008W PML1Q07930 204 aaPredicted RBP3.61□□□□□ -1.83
CHL1YPL008W FEX1Q08913 375 aa3.61□□□□□ -1.83
CHL1YPL008W RLM1Q12224 676 aa3.61□□□□□ -1.83
CHL1YPL008W BBP1Q12365 385 aa3.61□□□□□ -1.83
CHL1YPL008W TRM13Q12383 476 aa3.61□□□□□ -1.83
CHL1YPL008W YBR126W-AQ8TGU7 68 aa3.61□□□□□ -1.83
CHL1YPL008W RAD52P06778 471 aaKnown RBP3.61□□□□□ -1.83
CHL1YPL008W CHO1P08456 276 aa3.61□□□□□ -1.83
CHL1YPL008W YSF3P0C074 85 aaPredicted RBP3.61□□□□□ -1.83
CHL1YPL008W MATALPHA1P0CY06 175 aa3.61□□□□□ -1.83
CHL1YPL008W HMLALPHA1P0CY07 175 aa3.61□□□□□ -1.83
CHL1YPL008W PMT2P31382 759 aa3.61□□□□□ -1.83
CHL1YPL008W WBP1P33767 430 aaKnown RBP3.61□□□□□ -1.83
CHL1YPL008W SRP102P36057 244 aaPredicted RBP3.61□□□□□ -1.83
CHL1YPL008W YKR073CP36153 106 aa3.61□□□□□ -1.83
CHL1YPL008W FLO10P36170 1169 aa3.61□□□□□ -1.83
CHL1YPL008W HTD2P38790 280 aaKnown RBP3.61□□□□□ -1.83
CHL1YPL008W ARO9P38840 513 aaPredicted RBP3.61□□□□□ -1.83
CHL1YPL008W PHM8P40025 321 aa3.61□□□□□ -1.83
CHL1YPL008W YIL086CP40503 102 aa3.61□□□□□ -1.83
CHL1YPL008W CIS3P47001 227 aa3.61□□□□□ -1.83
CHL1YPL008W ECL1P48235 211 aa3.61□□□□□ -1.83
CHL1YPL008W SAY1P53324 424 aa3.61□□□□□ -1.83
CHL1YPL008W TIR4Q12218 487 aaPredicted RBP3.61□□□□□ -1.83
CHL1YPL008W ATG31Q12421 196 aa3.61□□□□□ -1.83
CHL1YPL008W YLR358CO13565 187 aa3.6□□□□□ -1.83
CHL1YPL008W MSW1P04803 379 aa3.6□□□□□ -1.83
CHL1YPL008W RPL20AP0CX23 172 aaKnown RBP3.6□□□□□ -1.83
CHL1YPL008W RPL20BP0CX24 172 aaPredicted RBP3.6□□□□□ -1.83
CHL1YPL008W AIM17P23180 465 aaKnown RBP3.6□□□□□ -1.83
CHL1YPL008W BOS1P25385 244 aa3.6□□□□□ -1.83
CHL1YPL008W YCR102CP25608 368 aa3.6□□□□□ -1.83
CHL1YPL008W HMX1P32339 317 aa3.6□□□□□ -1.83
CHL1YPL008W SPT10P35208 640 aa3.6□□□□□ -1.83
CHL1YPL008W SDS24P38314 527 aa3.6□□□□□ -1.83
CHL1YPL008W VMA7P39111 118 aa3.6□□□□□ -1.83
CHL1YPL008W GLO1P50107 326 aa3.6□□□□□ -1.83
CHL1YPL008W YNL092WP53934 400 aa3.6□□□□□ -1.83
CHL1YPL008W PRM15Q03262 622 aa3.6□□□□□ -1.83
CHL1YPL008W CDA2Q06703 312 aa3.6□□□□□ -1.83
CHL1YPL008W RAX1Q08760 435 aa3.6□□□□□ -1.83
CHL1YPL008W GPI12P23797 304 aa3.6□□□□□ -1.83
CHL1YPL008W CWP1P28319 239 aa3.6□□□□□ -1.83
CHL1YPL008W MDH3P32419 343 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
CHL1YPL008W YPT10P38146 199 aa3.6□□□□□ -1.83
CHL1YPL008W RPP1P38786 293 aa3.6□□□□□ -1.83
CHL1YPL008W FMP52P40008 231 aa3.6□□□□□ -1.83
CHL1YPL008W YLR152CP54072 576 aa3.6□□□□□ -1.83
CHL1YPL008W SMX3P54999 86 aaPredicted RBP3.6□□□□□ -1.83
CHL1YPL008W YML108WQ03759 105 aa3.6□□□□□ -1.83
CHL1YPL008W YDR249CQ03787 373 aa3.6□□□□□ -1.83
CHL1YPL008W SNX41Q04053 625 aa3.6□□□□□ -1.83
CHL1YPL008W MRX8Q05473 314 aa3.6□□□□□ -1.83
CHL1YPL008W COA4Q05809 96 aa3.6□□□□□ -1.83
CHL1YPL008W KEI1Q06346 221 aa3.6□□□□□ -1.83
CHL1YPL008W IRC19Q07843 230 aa3.6□□□□□ -1.83
CHL1YPL008W RRI1Q12468 440 aa3.6□□□□□ -1.83
CHL1YPL008W YDR034W-BQ6Q5X2 51 aa3.6□□□□□ -1.83
CHL1YPL008W KIN28P06242 306 aa3.59□□□□□ -1.83
CHL1YPL008W GRX2P17695 143 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W UTR1P21373 530 aa3.59□□□□□ -1.83
CHL1YPL008W RNA14P25298 677 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W STP22P25604 385 aa3.59□□□□□ -1.83
CHL1YPL008W FEN2P25621 512 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W YCR061WP25639 631 aa3.59□□□□□ -1.83
CHL1YPL008W PAD1P33751 242 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
CHL1YPL008W YUH1P35127 236 aa3.59□□□□□ -1.83
CHL1YPL008W RPS27AP35997 82 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W RPS27BP38711 82 aa3.59□□□□□ -1.83
CHL1YPL008W PTI1P39927 425 aaPredicted RBP3.59□□□□□ -1.83
CHL1YPL008W YMR144WP40214 342 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W PHB1P40961 287 aa3.59□□□□□ -1.83
CHL1YPL008W ABM1P47146 123 aa3.59□□□□□ -1.83
CHL1YPL008W SSN8P47821 323 aa3.59□□□□□ -1.83
CHL1YPL008W YVH1Q02256 364 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W INP1Q03694 420 aa3.59□□□□□ -1.83
CHL1YPL008W UTP15Q04305 513 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W VBA4Q04602 768 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W YMR252CQ04814 134 aa3.59□□□□□ -1.83
CHL1YPL008W BSC6Q08280 497 aa3.59□□□□□ -1.83
CHL1YPL008W YOR385WQ08909 290 aa3.59□□□□□ -1.83
CHL1YPL008W FEX2Q08991 375 aa3.59□□□□□ -1.83
CHL1YPL008W INP53Q12271 1107 aa3.59□□□□□ -1.83
CHL1YPL008W RDI1Q12434 202 aa3.59□□□□□ -1.83
CHL1YPL008W NAM2P11325 894 aa3.59□□□□□ -1.83
CHL1YPL008W CNE1P27825 502 aa3.59□□□□□ -1.83
CHL1YPL008W EHD3P28817 500 aa3.59□□□□□ -1.83
CHL1YPL008W MTC4P38335 694 aaKnown RBP3.59□□□□□ -1.83
CHL1YPL008W YHR180WP38868 163 aa3.59□□□□□ -1.83
CHL1YPL008W UME6P39001 836 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms