RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C ATG18P43601 500 aa5.08□□□□□ -1.6
UBC11YOR339C CIN2P46670 268 aa5.08□□□□□ -1.6
UBC11YOR339C YJL055WP47044 245 aa5.08□□□□□ -1.6
UBC11YOR339C MRH4P53166 561 aa5.08□□□□□ -1.6
UBC11YOR339C MTM1P53320 366 aa5.08□□□□□ -1.6
UBC11YOR339C AAH1P53909 347 aa5.08□□□□□ -1.6
UBC11YOR339C YNL092WP53934 400 aa5.08□□□□□ -1.6
UBC11YOR339C CIK1Q01649 594 aa5.08□□□□□ -1.6
UBC11YOR339C RPL6AQ02326 176 aaKnown RBP5.08□□□□□ -1.6
UBC11YOR339C DIG2Q03373 323 aaKnown RBP5.08□□□□□ -1.6
UBC11YOR339C TDA1Q03533 586 aa5.08□□□□□ -1.6
UBC11YOR339C MRPL35Q06678 367 aa5.08□□□□□ -1.6
UBC11YOR339C HEM25Q07534 307 aa5.08□□□□□ -1.6
UBC11YOR339C SUS1Q6WNK7 96 aa5.08□□□□□ -1.6
UBC11YOR339C SGA1P08019 549 aa5.07□□□□□ -1.6
UBC11YOR339C RPL43AP0CX25 92 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C RPL43BP0CX26 92 aa5.07□□□□□ -1.6
UBC11YOR339C RPI1P23250 407 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C HOM6P31116 359 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C MKS1P34072 584 aa5.07□□□□□ -1.6
UBC11YOR339C CLG1P35190 452 aa5.07□□□□□ -1.6
UBC11YOR339C RCN1P36054 211 aa5.07□□□□□ -1.6
UBC11YOR339C YBR096WP38256 230 aa5.07□□□□□ -1.6
UBC11YOR339C SSH1P38353 490 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C MIT1P40002 666 aa5.07□□□□□ -1.6
UBC11YOR339C RTT105P40063 208 aa5.07□□□□□ -1.6
UBC11YOR339C ATF1P40353 525 aa5.07□□□□□ -1.6
UBC11YOR339C SER2P42941 309 aa5.07□□□□□ -1.6
UBC11YOR339C YFL051CP43552 160 aa5.07□□□□□ -1.6
UBC11YOR339C CTK2P46962 323 aa5.07□□□□□ -1.6
UBC11YOR339C RSM23Q01163 450 aa5.07□□□□□ -1.6
UBC11YOR339C RSM28Q03430 361 aa5.07□□□□□ -1.6
UBC11YOR339C HAS1Q03532 505 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C API2Q04413 109 aa5.07□□□□□ -1.6
UBC11YOR339C PEX30Q06169 523 aa5.07□□□□□ -1.6
UBC11YOR339C RCN2Q12044 265 aa5.07□□□□□ -1.6
UBC11YOR339C ATG41Q12048 136 aa5.07□□□□□ -1.6
UBC11YOR339C WTM2Q12206 467 aa5.07□□□□□ -1.6
UBC11YOR339C ORT1Q12375 292 aa5.07□□□□□ -1.6
UBC11YOR339C ISA2Q12425 185 aa5.07□□□□□ -1.6
UBC11YOR339C YBL113CQ7M4S9 792 aa5.07□□□□□ -1.6
UBC11YOR339C PRP8P33334 2413 aaKnown RBP5.07□□□□□ -1.6
UBC11YOR339C NUM1Q00402 2748 aa5.06□□□□□ -1.6
UBC11YOR339C SSA3P09435 649 aaKnown RBP5.06□□□□□ -1.6
UBC11YOR339C DSF1P0CX08 502 aa5.06□□□□□ -1.6
UBC11YOR339C YNR073CP0CX09 502 aa5.06□□□□□ -1.6
UBC11YOR339C RPL35AP0CX84 120 aaKnown RBP5.06□□□□□ -1.6
UBC11YOR339C RPL35BP0CX85 120 aaKnown RBP5.06□□□□□ -1.6
UBC11YOR339C MATALPHA1P0CY06 175 aa5.06□□□□□ -1.6
UBC11YOR339C HMLALPHA1P0CY07 175 aa5.06□□□□□ -1.6
UBC11YOR339C NAM2P11325 894 aa5.06□□□□□ -1.6
UBC11YOR339C CNE1P27825 502 aa5.06□□□□□ -1.6
UBC11YOR339C APL3P38065 1025 aa5.06□□□□□ -1.6
UBC11YOR339C MBA1P38300 278 aa5.06□□□□□ -1.6
UBC11YOR339C YHL037CP38733 133 aa5.06□□□□□ -1.6
UBC11YOR339C FCY21P40039 528 aa5.06□□□□□ -1.6
UBC11YOR339C QDR1P40475 563 aa5.06□□□□□ -1.6
UBC11YOR339C YJL016WP47072 561 aa5.06□□□□□ -1.6
UBC11YOR339C PHB2P50085 310 aa5.06□□□□□ -1.6
UBC11YOR339C SIP18P50263 79 aa5.06□□□□□ -1.6
UBC11YOR339C POP6P53218 158 aa5.06□□□□□ -1.6
UBC11YOR339C SLI1P53304 468 aa5.06□□□□□ -1.6
UBC11YOR339C ERV29P53337 310 aa5.06□□□□□ -1.6
UBC11YOR339C NRK1P53915 240 aa5.06□□□□□ -1.6
UBC11YOR339C FRE3Q08905 711 aa5.06□□□□□ -1.6
UBC11YOR339C FIT3Q08907 204 aa5.06□□□□□ -1.6
UBC11YOR339C RNH203Q12338 110 aa5.06□□□□□ -1.6
UBC11YOR339C TDH3P00359 332 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
UBC11YOR339C PRE4P30657 266 aa5.05□□□□□ -1.6
UBC11YOR339C MRT4P33201 236 aaKnown RBP5.05□□□□□ -1.6
UBC11YOR339C SNC2P33328 115 aa5.05□□□□□ -1.6
UBC11YOR339C IPI1P38803 334 aaPredicted RBP5.05□□□□□ -1.6
UBC11YOR339C MSS4P38994 779 aa5.05□□□□□ -1.6
UBC11YOR339C AVT7P40501 490 aa5.05□□□□□ -1.6
UBC11YOR339C ERJ5P43613 295 aaPredicted RBP5.05□□□□□ -1.6
UBC11YOR339C IRC18P47056 224 aa5.05□□□□□ -1.6
UBC11YOR339C IMD3P50095 523 aaKnown RBP5.05□□□□□ -1.6
UBC11YOR339C YGL159WP53110 370 aa5.05□□□□□ -1.6
UBC11YOR339C RNH201P53942 307 aa5.05□□□□□ -1.6
UBC11YOR339C HHT1P61830 136 aa5.05□□□□□ -1.6
UBC11YOR339C BUD25P85052 153 aa5.05□□□□□ -1.6
UBC11YOR339C YPL077CQ02831 240 aa5.05□□□□□ -1.6
UBC11YOR339C MRL1Q06815 381 aa5.05□□□□□ -1.6
UBC11YOR339C FUR4P05316 633 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C RPL30P14120 105 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C PDA1P16387 420 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C DBF20P32328 564 aa5.04□□□□□ -1.6
UBC11YOR339C SPT14P32363 452 aa5.04□□□□□ -1.6
UBC11YOR339C MTC7P32633 139 aa5.04□□□□□ -1.6
UBC11YOR339C HTD2P38790 280 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C PIG2P40187 538 aa5.04□□□□□ -1.6
UBC11YOR339C FLX1P40464 311 aa5.04□□□□□ -1.6
UBC11YOR339C BUD8P41698 603 aa5.04□□□□□ -1.6
UBC11YOR339C BNA6P43619 295 aa5.04□□□□□ -1.6
UBC11YOR339C SCW4P53334 386 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C YNR048WP53740 393 aa5.04□□□□□ -1.6
UBC11YOR339C ACS1Q01574 713 aa5.04□□□□□ -1.6
UBC11YOR339C YDR391CQ04170 232 aa5.04□□□□□ -1.6
UBC11YOR339C RGC1Q06108 1083 aaKnown RBP5.04□□□□□ -1.6
UBC11YOR339C TPO3Q06451 622 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms