RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	RIB1	P38066	345 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	RTC3	P38804	111 aa	Predicted RBP	2.88	□□□□□ -1.95
CAF20	YOR276W	MIC19	P43594	170 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	CAX4	P53223	239 aa		2.88	□□□□□ -1.95
CAF20	YOR276W	ACT1	P60010	375 aa	Known RBP	2.88	□□□□□ -1.95
CAF20	YOR276W	RHO3	Q00245	231 aa	Known RBP	2.88	□□□□□ -1.95
CAF20	YOR276W	LDB16	P25587	256 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	PRP18	P33411	251 aa	Predicted RBP	2.87	□□□□□ -1.95
CAF20	YOR276W	PHO89	P38361	574 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	ASP1	P38986	381 aa	Predicted RBP	2.87	□□□□□ -1.95
CAF20	YOR276W	AVT6	P40074	448 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	SWT21	P53873	357 aa	Predicted RBP	2.87	□□□□□ -1.95
CAF20	YOR276W	SSQ1	Q05931	657 aa	Predicted RBP	2.87	□□□□□ -1.95
CAF20	YOR276W	ATG17	Q06410	417 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	YDL144C	Q07589	356 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	COQ10	Q08058	207 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	RFM1	Q12192	310 aa		2.87	□□□□□ -1.95
CAF20	YOR276W	TPI1	P00942	248 aa	Known RBP	2.86	□□□□□ -1.95
CAF20	YOR276W	CDC33	P07260	213 aa	Known RBP	2.86	□□□□□ -1.95
CAF20	YOR276W	RPS19A	P07280	144 aa	Known RBP	2.86	□□□□□ -1.95
CAF20	YOR276W	RPS19B	P07281	144 aa	Predicted RBP	2.86	□□□□□ -1.95
CAF20	YOR276W	YMR31	P19955	123 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	SGE1	P33335	543 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	FZO1	P38297	855 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	GOS1	P38736	223 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	FRT2	P39734	528 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	ERG28	P40030	148 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	UFE1	P41834	346 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	SNZ3	P43545	298 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	SNZ2	P53824	298 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	YDL211C	Q12121	372 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	SEY1	Q99287	776 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	SAC3	P46674	1301 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	AUS1	Q08409	1394 aa		2.86	□□□□□ -1.95
CAF20	YOR276W	YKR104W	P0CE69	306 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	STE18	P18852	110 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	PHO80	P20052	293 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	OSM1	P21375	501 aa	Known RBP	2.85	□□□□□ -1.95
CAF20	YOR276W	HMT1	P38074	348 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	YBL081W	P38180	368 aa	Known RBP	2.85	□□□□□ -1.95
CAF20	YOR276W	CUE1	P38428	203 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	ARN2	P38724	620 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	BDH1	P39714	382 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	COX15	P40086	486 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	YNL194C	P40169	301 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	RAD17	P48581	401 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	MRPS17	Q03246	237 aa	Predicted RBP	2.85	□□□□□ -1.95
CAF20	YOR276W	YPR147C	Q06522	304 aa	Known RBP	2.85	□□□□□ -1.95
CAF20	YOR276W	YKL183C-A	Q3E765	70 aa		2.85	□□□□□ -1.95
CAF20	YOR276W	CDC10	P25342	322 aa	Known RBP	2.84	□□□□□ -1.95
CAF20	YOR276W	ERG2	P32352	222 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	URA8	P38627	578 aa	Predicted RBP	2.84	□□□□□ -1.95
CAF20	YOR276W	SEO1	P39709	593 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	RPE1	P46969	238 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	SLX9	P53251	210 aa	Predicted RBP	2.84	□□□□□ -1.95
CAF20	YOR276W	YMR166C	Q03829	368 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	NNT1	Q05874	261 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	DXO1	Q06349	442 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	YLR126C	Q12288	251 aa		2.84	□□□□□ -1.95
CAF20	YOR276W	YBR121C-A	P0C5L4	52 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	MGM101	P32787	269 aa	Known RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	YHR127W	P38833	243 aa	Known RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	SYS1	P41544	203 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	YRB1	P41920	201 aa	Known RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	YFL012W	P43580	148 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	COQ5	P49017	307 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	CWC23	P52868	283 aa	Predicted RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	UFD1	P53044	361 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	GIM3	P53900	129 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	SPG4	Q04438	115 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	MRX8	Q05473	314 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	ATG38	Q05789	226 aa	Known RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	DIB1	Q06819	143 aa	Predicted RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	RRP40	Q08285	240 aa	Known RBP	2.83	□□□□□ -1.96
CAF20	YOR276W	SIR4	P11978	1358 aa		2.83	□□□□□ -1.96
CAF20	YOR276W	COS2	P0CX12	379 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	COS3	P0CX13	379 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	FUS3	P16892	353 aa	Known RBP	2.82	□□□□□ -1.96
CAF20	YOR276W	NTF2	P33331	125 aa	Known RBP	2.82	□□□□□ -1.96
CAF20	YOR276W	CSG2	P35206	410 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	YKL075C	P36083	450 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	COS4	P43542	379 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	CPR7	P47103	393 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	TRM9	P49957	279 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	AAH1	P53909	347 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	OSH6	Q02201	448 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	YPL039W	Q03080	316 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	CDC123	Q05791	360 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	GET4	Q12125	312 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	YPL150W	Q12152	901 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	YRA1	Q12159	226 aa	Known RBP	2.82	□□□□□ -1.96
CAF20	YOR276W	ATG5	Q12380	294 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	NCB2	Q92317	146 aa		2.82	□□□□□ -1.96
CAF20	YOR276W	JIP3	O13555	125 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	MATALPHA2	P0CY08	210 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	HMLALPHA2	P0CY09	210 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	CBF1	P17106	351 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	CPT1	P17898	393 aa		2.81	□□□□□ -1.96
CAF20	YOR276W	PRE7	P23724	241 aa	Known RBP	2.81	□□□□□ -1.96
CAF20	YOR276W	GDH2	P33327	1092 aa	Known RBP	2.81	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 399.7 ms