RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C DPB2P24482 689 aaPredicted RBP2.47□□□□□ -2.01
RPN8YOR261C SFC1P33303 322 aa2.47□□□□□ -2.01
RPN8YOR261C YGP1P38616 354 aaKnown RBP2.47□□□□□ -2.01
RPN8YOR261C PEX18P38855 283 aa2.47□□□□□ -2.01
RPN8YOR261C NIF3P53081 288 aa2.47□□□□□ -2.01
RPN8YOR261C TIM21P53220 239 aa2.47□□□□□ -2.01
RPN8YOR261C YMR114CQ04471 368 aaKnown RBP2.47□□□□□ -2.01
RPN8YOR261C PPH21P23594 369 aa2.46□□□□□ -2.02
RPN8YOR261C SPT8P38915 602 aa2.46□□□□□ -2.02
RPN8YOR261C TEM1P38987 245 aa2.46□□□□□ -2.02
RPN8YOR261C GON7P46984 123 aa2.46□□□□□ -2.02
RPN8YOR261C YJL028WP47062 111 aa2.46□□□□□ -2.02
RPN8YOR261C TY3A-GQ12173 290 aa2.46□□□□□ -2.02
RPN8YOR261C TY3A-IQ99219 290 aa2.46□□□□□ -2.02
RPN8YOR261C PRM9P39551 298 aa2.45□□□□□ -2.02
RPN8YOR261C YJL016WP47072 561 aa2.45□□□□□ -2.02
RPN8YOR261C MDM34P53083 459 aa2.45□□□□□ -2.02
RPN8YOR261C COS6P53344 381 aa2.45□□□□□ -2.02
RPN8YOR261C SLM2P53955 656 aa2.45□□□□□ -2.02
RPN8YOR261C GMC2Q06201 188 aa2.45□□□□□ -2.02
RPN8YOR261C SME1Q12330 94 aaPredicted RBP2.45□□□□□ -2.02
RPN8YOR261C SHC1P39000 512 aa2.44□□□□□ -2.02
RPN8YOR261C SLX9P53251 210 aaPredicted RBP2.44□□□□□ -2.02
RPN8YOR261C AAH1P53909 347 aa2.44□□□□□ -2.02
RPN8YOR261C GEP5Q12393 293 aa2.44□□□□□ -2.02
RPN8YOR261C MET16P18408 261 aaPredicted RBP2.43□□□□□ -2.02
RPN8YOR261C EBP2P36049 427 aaKnown RBP2.43□□□□□ -2.02
RPN8YOR261C DRE2P36152 348 aa2.43□□□□□ -2.02
RPN8YOR261C TIF34P40217 347 aaKnown RBP2.43□□□□□ -2.02
RPN8YOR261C TAD2P47058 250 aa2.43□□□□□ -2.02
RPN8YOR261C DAN1P47178 298 aa2.43□□□□□ -2.02
RPN8YOR261C BOP2Q06150 570 aa2.43□□□□□ -2.02
RPN8YOR261C CTR3Q06686 241 aa2.43□□□□□ -2.02
RPN8YOR261C HEK2P38199 381 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
RPN8YOR261C COA1P40452 197 aa2.42□□□□□ -2.02
RPN8YOR261C MRPL49P40858 161 aaPredicted RBP2.42□□□□□ -2.02
RPN8YOR261C EMI1Q04406 187 aa2.42□□□□□ -2.02
RPN8YOR261C RNP1P32385 249 aa2.41□□□□□ -2.02
RPN8YOR261C ECM13P38195 257 aa2.41□□□□□ -2.02
RPN8YOR261C KAP114P53067 1004 aa2.41□□□□□ -2.02
RPN8YOR261C MAL13P53338 473 aa2.41□□□□□ -2.02
RPN8YOR261C STH1P32597 1359 aa2.4□□□□□ -2.02
RPN8YOR261C SCO1P23833 295 aa2.4□□□□□ -2.03
RPN8YOR261C MAL32P38158 584 aa2.4□□□□□ -2.03
RPN8YOR261C MAL12P53341 584 aa2.4□□□□□ -2.03
RPN8YOR261C DCR2Q05924 578 aa2.4□□□□□ -2.03
RPN8YOR261C PST1Q12355 444 aa2.4□□□□□ -2.03
RPN8YOR261C NRG2P38082 220 aa2.39□□□□□ -2.03
RPN8YOR261C GRE3P38715 327 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
RPN8YOR261C YHL026CP38740 315 aa2.39□□□□□ -2.03
RPN8YOR261C RCY1P39531 840 aa2.39□□□□□ -2.03
RPN8YOR261C FCY21P40039 528 aa2.39□□□□□ -2.03
RPN8YOR261C DDI1P40087 428 aa2.39□□□□□ -2.03
RPN8YOR261C EMC6Q12431 108 aa2.39□□□□□ -2.03
RPN8YOR261C COX2P00410 251 aa2.38□□□□□ -2.03
RPN8YOR261C HIS1P00498 297 aaKnown RBP2.38□□□□□ -2.03
RPN8YOR261C SGA1P08019 549 aa2.38□□□□□ -2.03
RPN8YOR261C DSN1P40568 576 aa2.38□□□□□ -2.03
RPN8YOR261C NBP1P52919 319 aaPredicted RBP2.38□□□□□ -2.03
RPN8YOR261C RSM10Q03201 203 aa2.38□□□□□ -2.03
RPN8YOR261C PEX12Q04370 399 aa2.38□□□□□ -2.03
RPN8YOR261C PEX10Q05568 337 aa2.38□□□□□ -2.03
RPN8YOR261C OM45P16547 393 aa2.37□□□□□ -2.03
RPN8YOR261C YJR012CP47087 207 aa2.37□□□□□ -2.03
RPN8YOR261C OST6Q03723 332 aa2.37□□□□□ -2.03
RPN8YOR261C SSK22P25390 1331 aaPredicted RBP2.37□□□□□ -2.03
RPN8YOR261C RAD3P06839 778 aa2.36□□□□□ -2.03
RPN8YOR261C POX1P13711 748 aa2.36□□□□□ -2.03
RPN8YOR261C CWP1P28319 239 aa2.36□□□□□ -2.03
RPN8YOR261C SCM4P32564 187 aa2.36□□□□□ -2.03
RPN8YOR261C PET100P38958 111 aa2.36□□□□□ -2.03
RPN8YOR261C YAR1P46683 200 aa2.36□□□□□ -2.03
RPN8YOR261C EMP46Q12396 444 aa2.36□□□□□ -2.03
RPN8YOR261C YCR102CP25608 368 aa2.35□□□□□ -2.03
RPN8YOR261C QRI5P32344 111 aa2.35□□□□□ -2.03
RPN8YOR261C YOR062CP36025 268 aa2.35□□□□□ -2.03
RPN8YOR261C RPL10P41805 221 aaKnown RBP2.35□□□□□ -2.03
RPN8YOR261C EMC2P47133 292 aaKnown RBP2.35□□□□□ -2.03
RPN8YOR261C YGL034CP53186 121 aa2.35□□□□□ -2.03
RPN8YOR261C ALG11P53954 548 aaKnown RBP2.35□□□□□ -2.03
RPN8YOR261C EBS1Q03466 884 aaKnown RBP2.35□□□□□ -2.03
RPN8YOR261C SLD7Q08457 257 aa2.35□□□□□ -2.03
RPN8YOR261C YPR011CQ12251 326 aa2.35□□□□□ -2.03
RPN8YOR261C SNF8Q12483 233 aa2.35□□□□□ -2.03
RPN8YOR261C YPL119C-AQ3E751 87 aa2.35□□□□□ -2.03
RPN8YOR261C SAS5Q99314 248 aa2.35□□□□□ -2.03
RPN8YOR261C RPL24AP04449 155 aaKnown RBP2.34□□□□□ -2.03
RPN8YOR261C POL30P15873 258 aaKnown RBP2.34□□□□□ -2.03
RPN8YOR261C EHD3P28817 500 aa2.34□□□□□ -2.03
RPN8YOR261C MRPL37P36532 105 aa2.34□□□□□ -2.03
RPN8YOR261C OST2P46964 130 aa2.34□□□□□ -2.03
RPN8YOR261C YJL118WP47022 219 aa2.34□□□□□ -2.03
RPN8YOR261C YBL008W-AQ3E821 79 aa2.34□□□□□ -2.03
RPN8YOR261C CCA1P21269 546 aa2.33□□□□□ -2.04
RPN8YOR261C PRS2P38620 318 aaKnown RBP2.33□□□□□ -2.04
RPN8YOR261C YJL027CP47063 138 aaPredicted RBP2.33□□□□□ -2.04
RPN8YOR261C COX20Q04935 205 aa2.33□□□□□ -2.04
RPN8YOR261C VPS3P23643 1011 aa2.32□□□□□ -2.04
RPN8YOR261C PRS4P38063 326 aaPredicted RBP2.32□□□□□ -2.04
RPN8YOR261C YHR086W-AQ3E746 53 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms