RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W ERJ5P43613 295 aaPredicted RBP12.64□□□□□ -0.39
SHR5YOL110W RPL6AQ02326 176 aaKnown RBP12.64□□□□□ -0.39
SHR5YOL110W CRR1Q05790 422 aa12.64□□□□□ -0.39
SHR5YOL110W COX5BP00425 151 aa12.63□□□□□ -0.39
SHR5YOL110W MAK32P23060 363 aa12.63□□□□□ -0.39
SHR5YOL110W PRE4P30657 266 aa12.63□□□□□ -0.39
SHR5YOL110W MRT4P33201 236 aaKnown RBP12.63□□□□□ -0.39
SHR5YOL110W MRPS5P33759 307 aa12.63□□□□□ -0.39
SHR5YOL110W CLG1P35190 452 aa12.63□□□□□ -0.39
SHR5YOL110W TAT1P38085 619 aa12.63□□□□□ -0.39
SHR5YOL110W MOB2P43563 287 aa12.63□□□□□ -0.39
SHR5YOL110W CTK2P46962 323 aa12.63□□□□□ -0.39
SHR5YOL110W TPO3Q06451 622 aa12.63□□□□□ -0.39
SHR5YOL110W FRE3Q08905 711 aa12.63□□□□□ -0.39
SHR5YOL110W ORT1Q12375 292 aa12.63□□□□□ -0.39
SHR5YOL110W PHO4P07270 312 aaKnown RBP12.62□□□□□ -0.39
SHR5YOL110W RPL35AP0CX84 120 aaKnown RBP12.62□□□□□ -0.39
SHR5YOL110W RPL35BP0CX85 120 aaKnown RBP12.62□□□□□ -0.39
SHR5YOL110W CAP2P13517 287 aa12.62□□□□□ -0.39
SHR5YOL110W SNC2P33328 115 aa12.62□□□□□ -0.39
SHR5YOL110W APL3P38065 1025 aa12.62□□□□□ -0.39
SHR5YOL110W SMB1P40018 196 aaKnown RBP12.62□□□□□ -0.39
SHR5YOL110W POP6P53218 158 aa12.62□□□□□ -0.39
SHR5YOL110W PEX10Q05568 337 aa12.62□□□□□ -0.39
SHR5YOL110W DSF1P0CX08 502 aa12.61□□□□□ -0.39
SHR5YOL110W YNR073CP0CX09 502 aa12.61□□□□□ -0.39
SHR5YOL110W ATG15P25641 520 aa12.61□□□□□ -0.39
SHR5YOL110W HTD2P38790 280 aaKnown RBP12.61□□□□□ -0.39
SHR5YOL110W SEN34P39707 275 aa12.61□□□□□ -0.39
SHR5YOL110W YER084WP40057 128 aa12.61□□□□□ -0.39
SHR5YOL110W HEM25Q07534 307 aa12.61□□□□□ -0.39
SHR5YOL110W ISA2Q12425 185 aa12.61□□□□□ -0.39
SHR5YOL110W TDH3P00359 332 aaKnown RBP RIP-Chip data12.6□□□□□ -0.39not detected
SHR5YOL110W AFG1P32317 509 aa12.6□□□□□ -0.39
SHR5YOL110W HPA3P39979 161 aa12.6□□□□□ -0.39
SHR5YOL110W SCW4P53334 386 aaKnown RBP12.6□□□□□ -0.39
SHR5YOL110W YNR048WP53740 393 aa12.6□□□□□ -0.39
SHR5YOL110W CTF19Q02732 369 aa12.6□□□□□ -0.39
SHR5YOL110W SGA1P08019 549 aa12.59□□□□□ -0.39
SHR5YOL110W KRE6P32486 720 aa12.59□□□□□ -0.39
SHR5YOL110W DBF20P32328 564 aa12.58□□□□□ -0.4
SHR5YOL110W QDR1P40475 563 aa12.58□□□□□ -0.4
SHR5YOL110W SIP18P50263 79 aa12.58□□□□□ -0.4
SHR5YOL110W VHT1P53241 593 aa12.58□□□□□ -0.4
SHR5YOL110W FIT3Q08907 204 aa12.58□□□□□ -0.4
SHR5YOL110W INP53Q12271 1107 aa12.58□□□□□ -0.4
SHR5YOL110W FUR4P05316 633 aaKnown RBP12.57□□□□□ -0.4
SHR5YOL110W NAB2P32505 525 aaKnown RBP RIP-Chip data12.57□□□□□ -0.4not detected
SHR5YOL110W ATF1P40353 525 aa12.57□□□□□ -0.4
SHR5YOL110W SYS1P41544 203 aa12.57□□□□□ -0.4
SHR5YOL110W CIN2P46670 268 aa12.57□□□□□ -0.4
SHR5YOL110W MTL1P53214 551 aa12.57□□□□□ -0.4
SHR5YOL110W RNH201P53942 307 aa12.57□□□□□ -0.4
SHR5YOL110W HAS1Q03532 505 aaKnown RBP12.57□□□□□ -0.4
SHR5YOL110W SRL2Q12020 392 aa12.57□□□□□ -0.4
SHR5YOL110W MEC1P38111 2368 aa12.56□□□□□ -0.4
SHR5YOL110W HXT2P23585 541 aa12.56□□□□□ -0.4
SHR5YOL110W RPA14P50106 137 aa12.56□□□□□ -0.4
SHR5YOL110W TPN1P53099 579 aa12.56□□□□□ -0.4
SHR5YOL110W YGL159WP53110 370 aa12.56□□□□□ -0.4
SHR5YOL110W HHT1P61830 136 aa12.56□□□□□ -0.4
SHR5YOL110W ACS1Q01574 713 aa12.56□□□□□ -0.4
SHR5YOL110W YKR005CQ02203 525 aa12.56□□□□□ -0.4
SHR5YOL110W USB1Q12208 290 aaKnown RBP12.56□□□□□ -0.4
SHR5YOL110W TRA1P38811 3744 aa12.55□□□□□ -0.4
SHR5YOL110W CYC1P00044 109 aaPredicted RBP12.55□□□□□ -0.4
SHR5YOL110W RPL30P14120 105 aaKnown RBP12.55□□□□□ -0.4
SHR5YOL110W PUP1P25043 261 aa12.55□□□□□ -0.4
SHR5YOL110W AIM20P40451 204 aa12.55□□□□□ -0.4
SHR5YOL110W ARO8P53090 500 aaKnown RBP12.55□□□□□ -0.4
SHR5YOL110W LSM7P53905 115 aaKnown RBP12.55□□□□□ -0.4
SHR5YOL110W YDR391CQ04170 232 aa12.55□□□□□ -0.4
SHR5YOL110W YLR283WQ05867 314 aa12.55□□□□□ -0.4
SHR5YOL110W YLR358CO13565 187 aa12.54□□□□□ -0.4
SHR5YOL110W PET18P25362 215 aa12.54□□□□□ -0.4
SHR5YOL110W HYM1P32464 399 aa12.54□□□□□ -0.4
SHR5YOL110W PPZ2P33329 710 aa12.54□□□□□ -0.4
SHR5YOL110W SOL3P38858 249 aa12.54□□□□□ -0.4
SHR5YOL110W AVT7P40501 490 aa12.54□□□□□ -0.4
SHR5YOL110W BUD8P41698 603 aa12.54□□□□□ -0.4
SHR5YOL110W GPI14P47088 403 aaKnown RBP12.54□□□□□ -0.4
SHR5YOL110W AVT4P50944 713 aa12.54□□□□□ -0.4
SHR5YOL110W BUD25P85052 153 aa12.54□□□□□ -0.4
SHR5YOL110W KEI1Q06346 221 aa12.54□□□□□ -0.4
SHR5YOL110W GPM1P00950 247 aaKnown RBP12.53□□□□□ -0.4
SHR5YOL110W RPI1P23250 407 aaKnown RBP12.53□□□□□ -0.4
SHR5YOL110W CLB6P32943 380 aa12.53□□□□□ -0.4
SHR5YOL110W UMP1P38293 148 aa12.53□□□□□ -0.4
SHR5YOL110W PIG2P40187 538 aa12.53□□□□□ -0.4
SHR5YOL110W CAT5P41735 233 aa12.53□□□□□ -0.4
SHR5YOL110W GCD1P09032 578 aaPredicted RBP12.52□□□□□ -0.41
SHR5YOL110W ARO3P14843 370 aaKnown RBP12.52□□□□□ -0.41
SHR5YOL110W DEG1P31115 442 aaKnown RBP12.52□□□□□ -0.41
SHR5YOL110W YHL037CP38733 133 aa12.52□□□□□ -0.41
SHR5YOL110W TOK1P40310 691 aa12.52□□□□□ -0.41
SHR5YOL110W BXI1P48558 297 aa12.52□□□□□ -0.41
SHR5YOL110W PHB2P50085 310 aa12.52□□□□□ -0.41
SHR5YOL110W FMP48P53233 369 aa12.52□□□□□ -0.41
SHR5YOL110W RNH203Q12338 110 aa12.52□□□□□ -0.41
SHR5YOL110W ODC2Q99297 307 aa12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms