RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	ATX2	Q12067	313 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	DCN1	Q12395	269 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	RPS3	P05750	240 aa	Known RBP	3.56	□□□□□ -1.84
UBP10	YNL186W	RPL23A	P0CX41	137 aa	Known RBP	3.56	□□□□□ -1.84
UBP10	YNL186W	RPL23B	P0CX42	137 aa	Known RBP	3.56	□□□□□ -1.84
UBP10	YNL186W	PMT2	P31382	759 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	ATS1	P31386	333 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	RFS1	P38234	210 aa	Known RBP	3.56	□□□□□ -1.84
UBP10	YNL186W	BMT5	P40493	336 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	LCB3	P47013	409 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	AVT1	P47082	602 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	PEX10	Q05568	337 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	YLR446W	Q06204	433 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	RSA1	Q08932	381 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	CRC1	Q12289	327 aa		3.56	□□□□□ -1.84
UBP10	YNL186W	PET494	P07390	489 aa	Predicted RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	CDC10	P25342	322 aa	Known RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	FRT2	P39734	528 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	YPS5	P53057	165 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	ASI3	P53983	676 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	PEX30	Q06169	523 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	PER33	Q12144	273 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	RRP42	Q12277	265 aa	Predicted RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	CYC3	P06182	269 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	RPL20A	P0CX23	172 aa	Known RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	RPL20B	P0CX24	172 aa	Predicted RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	YFL068W	P0CX99	160 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	YLL066W-A	P0CY00	160 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	YLL067W-A	P0CY01	160 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	MDM10	P18409	493 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	CMK2	P22517	447 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	MAK31	P23059	88 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	AIM17	P23180	465 aa	Known RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	FUN26	P31381	517 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	FES1	P38260	290 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	RCK1	P38622	512 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	COX14	P39103	70 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	SLX9	P53251	210 aa	Predicted RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	PRM15	Q03262	622 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	MRX9	Q07349	420 aa	Known RBP	3.55	□□□□□ -1.84
UBP10	YNL186W	JLP1	Q12358	412 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	PCL9	Q12477	304 aa		3.55	□□□□□ -1.84
UBP10	YNL186W	HEM4	P06174	275 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	RPS14A	P06367	137 aa	Known RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	ERD1	P16151	362 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	DEP1	P31385	405 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	YBR062C	P38239	180 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	MTC4	P38335	694 aa	Known RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	CUE1	P38428	203 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	RPS14B	P39516	138 aa	Known RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	RPH1	P39956	796 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	HEM14	P40012	539 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	YKE4	P40544	346 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	SNA4	Q07549	140 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	YDL109C	Q12103	647 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	FCY22	Q12119	530 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	OPY1	P38271	328 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	NDT80	P38830	627 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	TMA22	P47089	198 aa	Predicted RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	TPC1	P53257	314 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	SSU72	P53538	206 aa	Predicted RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	MRS2	Q01926	470 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	DPP1	Q05521	289 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	YDL114W	Q07530	308 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	BRX1	Q08235	291 aa	Known RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	FOL3	Q12676	427 aa	Predicted RBP	3.54	□□□□□ -1.84
UBP10	YNL186W	LAA1	P39526	2014 aa		3.54	□□□□□ -1.84
UBP10	YNL186W	PIS1	P06197	220 aa	Known RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	INO2	P26798	304 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	SCO2	P38072	301 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	AME1	P38313	324 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	RRP3	P38712	501 aa	Known RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	PRE6	P40303	254 aa	Known RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	SNZ3	P43545	298 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	SNZ2	P53824	298 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	GOR1	P53839	350 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	SCS7	Q03529	384 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	RRP17	Q04031	235 aa	Predicted RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	YDR415C	Q04033	374 aa	Predicted RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	FAR10	Q06001	478 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	YPR091C	Q06833	770 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	COQ10	Q08058	207 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	CTA1	P15202	515 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	URA6	P15700	204 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	PHO80	P20052	293 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	PMU1	P36069	295 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	RFT1	P38206	574 aa	Predicted RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	GOS1	P38736	223 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	CHL4	P38907	458 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	UBP5	P39944	805 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	YJR141W	P47172	347 aa	Predicted RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	YJR149W	P47177	404 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	TRM9	P49957	279 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	YNL140C	P53910	189 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	VAC7	P53950	1165 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	YHC1	Q05900	231 aa	Known RBP	3.53	□□□□□ -1.84
UBP10	YNL186W	THI7	Q05998	598 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	ESA1	Q08649	445 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	MMT2	Q08970	484 aa		3.53	□□□□□ -1.84
UBP10	YNL186W	THP3	Q12049	470 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms