RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A DBP9Q06218 594 aaKnown RBP2.69□□□□□ -1.98
YSF3YNL138W-A MCT1Q12283 360 aa2.69□□□□□ -1.98
YSF3YNL138W-A SRN2Q99176 213 aa2.69□□□□□ -1.98
YSF3YNL138W-A RPC40P07703 335 aaKnown RBP2.68□□□□□ -1.98
YSF3YNL138W-A CTA1P15202 515 aa2.68□□□□□ -1.98
YSF3YNL138W-A DAL80P26343 269 aa2.68□□□□□ -1.98
YSF3YNL138W-A TPO5P36029 618 aa2.68□□□□□ -1.98
YSF3YNL138W-A GPI18P38211 433 aa2.68□□□□□ -1.98
YSF3YNL138W-A SOK1P40317 901 aa2.68□□□□□ -1.98
YSF3YNL138W-A YIR020CP40575 100 aa2.68□□□□□ -1.98
YSF3YNL138W-A IGD1P43598 195 aa2.68□□□□□ -1.98
YSF3YNL138W-A CIN2P46670 268 aa2.68□□□□□ -1.98
YSF3YNL138W-A RPA34P47006 233 aaPredicted RBP2.68□□□□□ -1.98
YSF3YNL138W-A MDM34P53083 459 aa2.68□□□□□ -1.98
YSF3YNL138W-A YLR446WQ06204 433 aa2.68□□□□□ -1.98
YSF3YNL138W-A PSY3Q12318 242 aa2.68□□□□□ -1.98
YSF3YNL138W-A DDP1Q99321 188 aaKnown RBP2.68□□□□□ -1.98
YSF3YNL138W-A ADH1P00330 348 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A RPS18AP0CX55 146 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A RPS18BP0CX56 146 aaPredicted RBP2.67□□□□□ -1.98
YSF3YNL138W-A TAL1P15019 335 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A ERD1P16151 362 aa2.67□□□□□ -1.98
YSF3YNL138W-A CMK2P22517 447 aa2.67□□□□□ -1.98
YSF3YNL138W-A ITR2P30606 609 aa2.67□□□□□ -1.98
YSF3YNL138W-A HSP150P32478 413 aa2.67□□□□□ -1.98
YSF3YNL138W-A SSE1P32589 693 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A YEL043WP32618 956 aa2.67□□□□□ -1.98
YSF3YNL138W-A MID2P36027 376 aa2.67□□□□□ -1.98
YSF3YNL138W-A ADH5P38113 351 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A RTT105P40063 208 aa2.67□□□□□ -1.98
YSF3YNL138W-A ALB1P47019 175 aaPredicted RBP2.67□□□□□ -1.98
YSF3YNL138W-A YPS5P53057 165 aa2.67□□□□□ -1.98
YSF3YNL138W-A YGR018CP53211 109 aa2.67□□□□□ -1.98
YSF3YNL138W-A LSM3P57743 89 aaKnown RBP2.67□□□□□ -1.98
YSF3YNL138W-A LAP3Q01532 483 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
YSF3YNL138W-A TLG1Q03322 224 aa2.67□□□□□ -1.98
YSF3YNL138W-A SDC1Q03323 175 aa2.67□□□□□ -1.98
YSF3YNL138W-A YLL007CQ07799 665 aa2.67□□□□□ -1.98
YSF3YNL138W-A YPR011CQ12251 326 aa2.67□□□□□ -1.98
YSF3YNL138W-A YPR064WQ12492 139 aa2.67□□□□□ -1.98
YSF3YNL138W-A STE2D6VTK4 431 aa2.66□□□□□ -1.98
YSF3YNL138W-A REP1P03871 373 aa2.66□□□□□ -1.98
YSF3YNL138W-A STE3P06783 470 aa2.66□□□□□ -1.98
YSF3YNL138W-A YHR214C-DP0CX93 97 aa2.66□□□□□ -1.98
YSF3YNL138W-A GIT1P25346 518 aa2.66□□□□□ -1.98
YSF3YNL138W-A HIS2P38635 335 aa2.66□□□□□ -1.98
YSF3YNL138W-A YHL044WP38727 235 aa2.66□□□□□ -1.98
YSF3YNL138W-A SMF2P38778 549 aa2.66□□□□□ -1.98
YSF3YNL138W-A NPT1P39683 429 aaKnown RBP2.66□□□□□ -1.98
YSF3YNL138W-A YGL262WP53054 175 aa2.66□□□□□ -1.98
YSF3YNL138W-A ERV25P54837 211 aaKnown RBP2.66□□□□□ -1.98
YSF3YNL138W-A RAF1Q06891 181 aa2.66□□□□□ -1.98
YSF3YNL138W-A YLR036CQ07986 203 aa2.66□□□□□ -1.98
YSF3YNL138W-A RTC5Q12108 567 aaKnown RBP2.66□□□□□ -1.98
YSF3YNL138W-A RRP42Q12277 265 aaPredicted RBP2.66□□□□□ -1.98
YSF3YNL138W-A MDY2Q12285 212 aa2.66□□□□□ -1.98
YSF3YNL138W-A RTR2Q12378 196 aa2.66□□□□□ -1.98
YSF3YNL138W-A YIL002W-AQ3E7Z5 69 aa2.66□□□□□ -1.98
YSF3YNL138W-A YOS9Q99220 542 aa2.66□□□□□ -1.98
YSF3YNL138W-A CAR2P07991 424 aaKnown RBP2.65□□□□□ -1.99
YSF3YNL138W-A SEC14P24280 304 aaKnown RBP2.65□□□□□ -1.99
YSF3YNL138W-A DEP1P31385 405 aa2.65□□□□□ -1.99
YSF3YNL138W-A IME2P32581 645 aa2.65□□□□□ -1.99
YSF3YNL138W-A MRPL27P36526 146 aaPredicted RBP2.65□□□□□ -1.99
YSF3YNL138W-A YBR220CP38318 560 aa2.65□□□□□ -1.99
YSF3YNL138W-A HSM3P38348 480 aa2.65□□□□□ -1.99
YSF3YNL138W-A EFM1P38732 585 aa2.65□□□□□ -1.99
YSF3YNL138W-A LSM12P38828 187 aaKnown RBP2.65□□□□□ -1.99
YSF3YNL138W-A ECM14P38836 430 aa2.65□□□□□ -1.99
YSF3YNL138W-A AST2P39945 430 aaKnown RBP2.65□□□□□ -1.99
YSF3YNL138W-A AYR1P40471 297 aa2.65□□□□□ -1.99
YSF3YNL138W-A AGE2P40529 298 aa2.65□□□□□ -1.99
YSF3YNL138W-A SNL1P40548 159 aa2.65□□□□□ -1.99
YSF3YNL138W-A YFL012WP43580 148 aa2.65□□□□□ -1.99
YSF3YNL138W-A KEL2P50090 882 aa2.65□□□□□ -1.99
YSF3YNL138W-A YLR460CP54007 376 aa2.65□□□□□ -1.99
YSF3YNL138W-A SPP2Q02521 185 aa2.65□□□□□ -1.99
YSF3YNL138W-A GRX3Q03835 250 aa2.65□□□□□ -1.99
YSF3YNL138W-A YMR310CQ04867 317 aaPredicted RBP2.65□□□□□ -1.99
YSF3YNL138W-A MSC3Q05812 728 aa2.65□□□□□ -1.99
YSF3YNL138W-A YLR177WQ06251 628 aa2.65□□□□□ -1.99
YSF3YNL138W-A PEX27Q08580 376 aa2.65□□□□□ -1.99
YSF3YNL138W-A QCR6P00127 147 aa2.64□□□□□ -1.99
YSF3YNL138W-A TFS1P14306 219 aa2.64□□□□□ -1.99
YSF3YNL138W-A DBR1P24309 405 aaKnown RBP2.64□□□□□ -1.99
YSF3YNL138W-A TRX3P25372 127 aa2.64□□□□□ -1.99
YSF3YNL138W-A BFR1P38934 470 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
YSF3YNL138W-A SMC2P38989 1170 aaKnown RBP2.64□□□□□ -1.99
YSF3YNL138W-A LYS12P40495 371 aaKnown RBP2.64□□□□□ -1.99
YSF3YNL138W-A NAS2P40555 220 aa2.64□□□□□ -1.99
YSF3YNL138W-A PRM10P42946 383 aa2.64□□□□□ -1.99
YSF3YNL138W-A TIM11P81449 96 aaPredicted RBP2.64□□□□□ -1.99
YSF3YNL138W-A VPS71Q03433 280 aa2.64□□□□□ -1.99
YSF3YNL138W-A YMR010WQ03687 405 aa2.64□□□□□ -1.99
YSF3YNL138W-A RIM9Q04734 239 aa2.64□□□□□ -1.99
YSF3YNL138W-A YPL245WQ12179 454 aaKnown RBP2.64□□□□□ -1.99
YSF3YNL138W-A RRP36Q12481 300 aaPredicted RBP2.64□□□□□ -1.99
YSF3YNL138W-A RSR1P13856 272 aa2.63□□□□□ -1.99
YSF3YNL138W-A MSK1P32048 576 aa2.63□□□□□ -1.99
YSF3YNL138W-A RIB7P33312 244 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms