RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	BET5	Q03630	159 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	MGR3	Q04472	501 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	YML096W	Q04489	525 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	RNH202	Q05635	350 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	PBA1	Q05778	276 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	BOP2	Q06150	570 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	YLR446W	Q06204	433 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	MDM36	Q06820	579 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	SKS1	Q12505	502 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	MTR10	Q99189	972 aa		3.13	□□□□□ -1.91
TPM1	YNL079C	MEX67	Q99257	599 aa	Known RBP	3.13	□□□□□ -1.91
TPM1	YNL079C	GAL7	P08431	366 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	RPB5	P20434	215 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	DEG1	P31115	442 aa	Known RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	CDC13	P32797	924 aa	Known RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	SUI1	P32911	108 aa	Known RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	RIB7	P33312	244 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	YBL059W	P34224	193 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	SRX1	P36077	127 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	FMP23	P38231	175 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	WSC4	P38739	605 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	TIF34	P40217	347 aa	Known RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	VHS2	P40463	436 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	SPG5	P42933	373 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	JHD2	P47156	728 aa	Predicted RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	NUP57	P48837	541 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	PHB2	P50085	310 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	MPC1	P53157	130 aa	Known RBP	3.12	□□□□□ -1.91
TPM1	YNL079C	CDH1	P53197	566 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	MTQ1	P53944	314 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	CIK1	Q01649	594 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	ABZ2	Q03266	374 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	MAK3	Q03503	176 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	FDH1	Q08911	376 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	SIA1	Q12212	622 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	YOL107W	Q12239	342 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	RBD2	Q12270	262 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	LAG2	Q92325	660 aa		3.12	□□□□□ -1.91
TPM1	YNL079C	STT4	P37297	1900 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	HHF1	P02309	103 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	NFT1	P0CE68	1218 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	YOL163W	P0CF20	169 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	RPL24B	P24000	155 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	GIT1	P25346	518 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	TAH1	P25638	111 aa	Predicted RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	NAM9	P27929	486 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	OAC1	P32332	324 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	PUP2	P32379	260 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	SKN1	P33336	771 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	GPX2	P38143	162 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	MTC6	P38849	526 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	PEX18	P38855	283 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	MNL1	P38888	796 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	PRM5	P40476	318 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	RPL10	P41805	221 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	WWM1	P43582	211 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	NCA3	P46955	337 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	YJL055W	P47044	245 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	RPS12	P48589	143 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	SYF2	P53277	215 aa	Predicted RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	SWS2	P53937	143 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	EGD1	Q02642	157 aa	Known RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	SNZ1	Q03148	297 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	GRX3	Q03835	250 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	NAT4	Q04751	285 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	SNT309	Q06091	175 aa	Predicted RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	MMT2	Q08970	484 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	AEP3	Q12089	606 aa		3.11	□□□□□ -1.91
TPM1	YNL079C	DCP1	Q12517	231 aa	Predicted RBP	3.11	□□□□□ -1.91
TPM1	YNL079C	YPR117W	Q06116	2489 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	CAR2	P07991	424 aa	Known RBP	3.1	□□□□□ -1.91
TPM1	YNL079C	MET2	P08465	486 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	SNF6	P18888	332 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	ARO7	P32178	256 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
TPM1	YNL079C	YOR062C	P36025	268 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	SRL3	P36167	246 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	PRP39	P39682	629 aa	Known RBP	3.1	□□□□□ -1.91
TPM1	YNL079C	GDI1	P39958	451 aa	Known RBP	3.1	□□□□□ -1.91
TPM1	YNL079C	AIM10	P39965	576 aa	Known RBP	3.1	□□□□□ -1.91
TPM1	YNL079C	FCY21	P40039	528 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	YPS6	P40583	537 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	STB1	P42845	420 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	HOC1	P47124	396 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	DBP6	P53734	629 aa	Known RBP	3.1	□□□□□ -1.91
TPM1	YNL079C	COS1	P53822	381 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	RCF1	Q03713	159 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	URC2	Q04411	772 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	ELP6	Q04868	273 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	SRL2	Q12020	392 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	TMS1	Q12116	473 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	YDR262W	Q12331	272 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	CCH1	P50077	2039 aa		3.1	□□□□□ -1.91
TPM1	YNL079C	FAB1	P34756	2278 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	YOL162W	P0CF19	215 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	BUD23	P25627	275 aa	Predicted RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
TPM1	YNL079C	ARC19	P33204	171 aa	Known RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	RPS20	P38701	121 aa	Known RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	ECM34	P38728	170 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms