RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YFR020WP43600 232 aa4.54□□□□□ -1.68
PSE1YMR308C IRC18P47056 224 aa4.54□□□□□ -1.68
PSE1YMR308C FRE4P53746 719 aa4.54□□□□□ -1.68
PSE1YMR308C ELC1Q03071 99 aa4.54□□□□□ -1.68
PSE1YMR308C BSP1Q06604 576 aa4.54□□□□□ -1.68
PSE1YMR308C YER039C-AP0CD97 72 aa4.53□□□□□ -1.68
PSE1YMR308C SPT15P13393 240 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C FUB1P25659 250 aa4.53□□□□□ -1.68
PSE1YMR308C NUP2P32499 720 aa4.53□□□□□ -1.68
PSE1YMR308C SFK1P35735 353 aa4.53□□□□□ -1.68
PSE1YMR308C YEA6P39953 335 aa4.53□□□□□ -1.68
PSE1YMR308C MIT1P40002 666 aa4.53□□□□□ -1.68
PSE1YMR308C SKP1P52286 194 aa4.53□□□□□ -1.68
PSE1YMR308C UBC12P52491 188 aa4.53□□□□□ -1.68
PSE1YMR308C VPS28Q02767 242 aa4.53□□□□□ -1.68
PSE1YMR308C SAM4Q08985 325 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C PFA4Q12006 378 aa4.53□□□□□ -1.68
PSE1YMR308C AHA1Q12449 350 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C RAX2Q12465 1220 aa4.53□□□□□ -1.68
PSE1YMR308C SAL1D6W196 494 aa4.53□□□□□ -1.68
PSE1YMR308C YBR085C-AO43137 85 aa4.53□□□□□ -1.68
PSE1YMR308C RPB5P20434 215 aa4.53□□□□□ -1.68
PSE1YMR308C GPI12P23797 304 aa4.53□□□□□ -1.68
PSE1YMR308C SCO1P23833 295 aa4.53□□□□□ -1.68
PSE1YMR308C PDX3P38075 228 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C LSM2P38203 95 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C QDR3P38227 689 aa4.53□□□□□ -1.68
PSE1YMR308C MBA1P38300 278 aa4.53□□□□□ -1.68
PSE1YMR308C POP1P41812 875 aa4.53□□□□□ -1.68
PSE1YMR308C IRC8P47046 822 aa4.53□□□□□ -1.68
PSE1YMR308C YIP5P53108 310 aa4.53□□□□□ -1.68
PSE1YMR308C ALG13P53178 202 aa4.53□□□□□ -1.68
PSE1YMR308C YGR151CP53287 111 aa4.53□□□□□ -1.68
PSE1YMR308C MRPL22P53881 309 aa4.53□□□□□ -1.68
PSE1YMR308C YNL010WP53981 241 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C EMG1Q06287 252 aaKnown RBP4.53□□□□□ -1.68
PSE1YMR308C SLD7Q08457 257 aa4.53□□□□□ -1.68
PSE1YMR308C RAD28Q12021 506 aa4.53□□□□□ -1.68
PSE1YMR308C YLL058WQ12198 575 aa4.53□□□□□ -1.68
PSE1YMR308C YLR462WO13556 202 aa4.52□□□□□ -1.69
PSE1YMR308C COX5BP00425 151 aa4.52□□□□□ -1.69
PSE1YMR308C STE7P06784 515 aa4.52□□□□□ -1.69
PSE1YMR308C EPT1P22140 391 aa4.52□□□□□ -1.69
PSE1YMR308C NAB2P32505 525 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
PSE1YMR308C SRB6P32570 121 aa4.52□□□□□ -1.69
PSE1YMR308C LAG1P38703 411 aa4.52□□□□□ -1.69
PSE1YMR308C ARG2P40360 574 aa4.52□□□□□ -1.69
PSE1YMR308C YFL064CP43540 174 aa4.52□□□□□ -1.69
PSE1YMR308C DAN1P47178 298 aa4.52□□□□□ -1.69
PSE1YMR308C MDM34P53083 459 aa4.52□□□□□ -1.69
PSE1YMR308C TDA1Q03533 586 aa4.52□□□□□ -1.69
PSE1YMR308C YDR415CQ04033 374 aaPredicted RBP4.52□□□□□ -1.69
PSE1YMR308C CNL1Q06333 122 aa4.52□□□□□ -1.69
PSE1YMR308C MDM32Q12171 622 aa4.52□□□□□ -1.69
PSE1YMR308C KOG1P38873 1557 aa4.52□□□□□ -1.69
PSE1YMR308C STE14P32584 239 aa4.52□□□□□ -1.69
PSE1YMR308C TRS65P32893 560 aa4.52□□□□□ -1.69
PSE1YMR308C PPZ2P33329 710 aa4.52□□□□□ -1.69
PSE1YMR308C SGE1P33335 543 aa4.52□□□□□ -1.69
PSE1YMR308C YBR285WP38354 144 aa4.52□□□□□ -1.69
PSE1YMR308C YER189WP40104 122 aa4.52□□□□□ -1.69
PSE1YMR308C MRH4P53166 561 aa4.52□□□□□ -1.69
PSE1YMR308C CLD1P53264 445 aa4.52□□□□□ -1.69
PSE1YMR308C YNL092WP53934 400 aa4.52□□□□□ -1.69
PSE1YMR308C AIM39Q08223 395 aa4.52□□□□□ -1.69
PSE1YMR308C YPR071WQ12346 211 aa4.52□□□□□ -1.69
PSE1YMR308C GDH1P07262 454 aaKnown RBP4.52□□□□□ -1.69
PSE1YMR308C ATG15P25641 520 aa4.52□□□□□ -1.69
PSE1YMR308C MDL2P33311 773 aa4.52□□□□□ -1.69
PSE1YMR308C YBR096WP38256 230 aa4.52□□□□□ -1.69
PSE1YMR308C ARO9P38840 513 aaPredicted RBP4.52□□□□□ -1.69
PSE1YMR308C MNN5P46982 586 aa4.52□□□□□ -1.69
PSE1YMR308C NUP57P48837 541 aa4.52□□□□□ -1.69
PSE1YMR308C POP6P53218 158 aa4.52□□□□□ -1.69
PSE1YMR308C SUR7P54003 302 aa4.52□□□□□ -1.69
PSE1YMR308C LRS4Q04087 347 aaKnown RBP4.52□□□□□ -1.69
PSE1YMR308C YPR109WQ06104 294 aa4.52□□□□□ -1.69
PSE1YMR308C TEN1Q07921 160 aa4.52□□□□□ -1.69
PSE1YMR308C THP1Q08231 455 aa4.52□□□□□ -1.69
PSE1YMR308C COX17Q12287 69 aa4.52□□□□□ -1.69
PSE1YMR308C PST1Q12355 444 aa4.52□□□□□ -1.69
PSE1YMR308C ZPS1Q12512 249 aa4.52□□□□□ -1.69
PSE1YMR308C DET1Q99288 334 aaKnown RBP4.52□□□□□ -1.69
PSE1YMR308C FLP1P03870 423 aa4.51□□□□□ -1.69
PSE1YMR308C SAM2P19358 384 aaKnown RBP4.51□□□□□ -1.69
PSE1YMR308C YOR062CP36025 268 aa4.51□□□□□ -1.69
PSE1YMR308C DOG1P38774 246 aa4.51□□□□□ -1.69
PSE1YMR308C YHR130CP38834 111 aa4.51□□□□□ -1.69
PSE1YMR308C PEX7P39108 375 aa4.51□□□□□ -1.69
PSE1YMR308C SNM1P40993 198 aa4.51□□□□□ -1.69
PSE1YMR308C UBC11P52492 156 aa4.51□□□□□ -1.69
PSE1YMR308C STR3P53101 465 aaKnown RBP4.51□□□□□ -1.69
PSE1YMR308C RSC9Q03124 581 aa4.51□□□□□ -1.69
PSE1YMR308C CSI2Q08054 341 aa4.51□□□□□ -1.69
PSE1YMR308C YJR112W-AQ3E743 109 aa4.51□□□□□ -1.69
PSE1YMR308C PCC1Q3E833 88 aa4.51□□□□□ -1.69
PSE1YMR308C CHO1P08456 276 aa4.51□□□□□ -1.69
PSE1YMR308C DRE2P36152 348 aa4.51□□□□□ -1.69
PSE1YMR308C YBL029WP38201 376 aa4.51□□□□□ -1.69
PSE1YMR308C SUT1P53032 299 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms