RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YOR029WQ12243 111 aa2.17□□□□□ -2.06
UBP15YMR304W YDR262WQ12331 272 aa2.17□□□□□ -2.06
UBP15YMR304W AIM45Q12480 344 aaKnown RBP2.17□□□□□ -2.06
UBP15YMR304W SAS5Q99314 248 aa2.17□□□□□ -2.06
UBP15YMR304W SEC16P48415 2195 aaKnown RBP2.17□□□□□ -2.06
UBP15YMR304W MSW1P04803 379 aa2.17□□□□□ -2.06
UBP15YMR304W TRR2P38816 342 aa2.17□□□□□ -2.06
UBP15YMR304W NSG1P38837 291 aa2.17□□□□□ -2.06
UBP15YMR304W PSD1P39006 500 aa2.17□□□□□ -2.06
UBP15YMR304W SSP120P39931 234 aaKnown RBP2.17□□□□□ -2.06
UBP15YMR304W SMB1P40018 196 aaKnown RBP2.17□□□□□ -2.06
UBP15YMR304W YIL012WP40551 113 aa2.17□□□□□ -2.06
UBP15YMR304W MET28P40573 187 aa2.17□□□□□ -2.06
UBP15YMR304W PHO23P50947 330 aa2.17□□□□□ -2.06
UBP15YMR304W YGR164WP53291 111 aa2.17□□□□□ -2.06
UBP15YMR304W SKO1Q02100 647 aa2.17□□□□□ -2.06
UBP15YMR304W ECM9Q02202 377 aa2.17□□□□□ -2.06
UBP15YMR304W ATG21Q02887 496 aa2.17□□□□□ -2.06
UBP15YMR304W BET5Q03630 159 aa2.17□□□□□ -2.06
UBP15YMR304W YLR224WQ05947 369 aa2.17□□□□□ -2.06
UBP15YMR304W YET3Q07451 203 aa2.17□□□□□ -2.06
UBP15YMR304W NSL1Q12143 216 aa2.17□□□□□ -2.06
UBP15YMR304W TPT1Q12272 230 aaKnown RBP2.17□□□□□ -2.06
UBP15YMR304W SFG1Q12507 346 aa2.17□□□□□ -2.06
UBP15YMR304W SPO24Q3E752 67 aa2.17□□□□□ -2.06
UBP15YMR304W YMR175W-AQ3E766 64 aa2.17□□□□□ -2.06
UBP15YMR304W HEM13P11353 328 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W RPA12P32529 125 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W AIM26P32858 118 aa2.16□□□□□ -2.06
UBP15YMR304W RRP3P38712 501 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W PMT3P47190 753 aa2.16□□□□□ -2.06
UBP15YMR304W SIA1Q12212 622 aa2.16□□□□□ -2.06
UBP15YMR304W YOR114WQ12219 294 aa2.16□□□□□ -2.06
UBP15YMR304W PRR2Q12310 699 aa2.16□□□□□ -2.06
UBP15YMR304W NDJ1Q12366 352 aa2.16□□□□□ -2.06
UBP15YMR304W RPL13AQ12690 199 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W YCR075W-AQ3E830 75 aa2.16□□□□□ -2.06
UBP15YMR304W ILV5P06168 395 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W MSS18P08593 268 aa2.16□□□□□ -2.06
UBP15YMR304W RPS16AP0CX51 143 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W RPS16BP0CX52 143 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W RPS18AP0CX55 146 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W RPS18BP0CX56 146 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W SNF4P12904 322 aa2.16□□□□□ -2.06
UBP15YMR304W SCO1P23833 295 aa2.16□□□□□ -2.06
UBP15YMR304W IFM1P25038 676 aa2.16□□□□□ -2.06
UBP15YMR304W CMK1P27466 446 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W MDH3P32419 343 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
UBP15YMR304W SRY1P36007 326 aa2.16□□□□□ -2.06
UBP15YMR304W TAE1P38340 232 aa2.16□□□□□ -2.06
UBP15YMR304W GIC1P38785 314 aa2.16□□□□□ -2.06
UBP15YMR304W YEA6P39953 335 aa2.16□□□□□ -2.06
UBP15YMR304W PIC2P40035 300 aa2.16□□□□□ -2.06
UBP15YMR304W GWT1P47026 490 aa2.16□□□□□ -2.06
UBP15YMR304W APM1Q00776 475 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W RSM23Q01163 450 aa2.16□□□□□ -2.06
UBP15YMR304W TMA23Q03525 211 aa2.16□□□□□ -2.06
UBP15YMR304W TRM12Q04235 462 aa2.16□□□□□ -2.06
UBP15YMR304W GRX8Q05926 109 aa2.16□□□□□ -2.06
UBP15YMR304W RRP42Q12277 265 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W DFM1Q12743 341 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W PRP8P33334 2413 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W CDC33P07260 213 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W CHO1P08456 276 aa2.16□□□□□ -2.06
UBP15YMR304W YBR121C-AP0C5L4 52 aa2.16□□□□□ -2.06
UBP15YMR304W SAM2P19358 384 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W URA10P30402 227 aa2.16□□□□□ -2.06
UBP15YMR304W APL3P38065 1025 aa2.16□□□□□ -2.06
UBP15YMR304W RIB1P38066 345 aa2.16□□□□□ -2.06
UBP15YMR304W FYV4P38783 130 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W LRP1P38801 184 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W CHL4P38907 458 aa2.16□□□□□ -2.06
UBP15YMR304W MIT1P40002 666 aa2.16□□□□□ -2.06
UBP15YMR304W SER2P42941 309 aa2.16□□□□□ -2.06
UBP15YMR304W BUD13P46947 266 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W YJL016WP47072 561 aa2.16□□□□□ -2.06
UBP15YMR304W YML6P51998 286 aa2.16□□□□□ -2.06
UBP15YMR304W AIF1P52923 378 aa2.16□□□□□ -2.06
UBP15YMR304W YGL138CP53122 345 aa2.16□□□□□ -2.06
UBP15YMR304W YGR168CP53293 376 aa2.16□□□□□ -2.06
UBP15YMR304W RHO5P53879 331 aaKnown RBP2.16□□□□□ -2.06
UBP15YMR304W SMX3P54999 86 aaPredicted RBP2.16□□□□□ -2.06
UBP15YMR304W PLB2Q03674 706 aa2.16□□□□□ -2.06
UBP15YMR304W FMP25Q08023 583 aa2.16□□□□□ -2.06
UBP15YMR304W LDS2Q08218 356 aa2.16□□□□□ -2.06
UBP15YMR304W RAD28Q12021 506 aa2.16□□□□□ -2.06
UBP15YMR304W SPE4Q12455 300 aa2.16□□□□□ -2.06
UBP15YMR304W RRI1Q12468 440 aa2.16□□□□□ -2.06
UBP15YMR304W YNR034W-AQ3E841 98 aa2.16□□□□□ -2.06
UBP15YMR304W YBR085C-AO43137 85 aa2.15□□□□□ -2.06
UBP15YMR304W BUB2P26448 306 aaPredicted RBP2.15□□□□□ -2.06
UBP15YMR304W IDH2P28241 369 aaKnown RBP2.15□□□□□ -2.06
UBP15YMR304W UBC8P28263 218 aa2.15□□□□□ -2.06
UBP15YMR304W EMP70P32802 667 aa2.15□□□□□ -2.06
UBP15YMR304W THI2P38141 450 aa2.15□□□□□ -2.06
UBP15YMR304W YBR220CP38318 560 aa2.15□□□□□ -2.06
UBP15YMR304W YER189WP40104 122 aa2.15□□□□□ -2.06
UBP15YMR304W YMR144WP40214 342 aaKnown RBP2.15□□□□□ -2.06
UBP15YMR304W ECM27P47144 725 aa2.15□□□□□ -2.06
UBP15YMR304W SNN1P48232 102 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms