RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C SHS1Q07657 551 aa6.81□□□□□ -1.32
NDE1YMR145C TY1A-BLQ12266 440 aa6.81□□□□□ -1.32
NDE1YMR145C RPS25BP0C0T4 108 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C YCK2P23292 546 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C PUT3P25502 979 aaPredicted RBP6.81□□□□□ -1.32
NDE1YMR145C RIB1P38066 345 aa6.81□□□□□ -1.32
NDE1YMR145C ROT2P38138 954 aa6.81□□□□□ -1.32
NDE1YMR145C MTC4P38335 694 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C DOG2P38773 246 aa6.81□□□□□ -1.32
NDE1YMR145C SSN3P39073 555 aa6.81□□□□□ -1.32
NDE1YMR145C PRE6P40303 254 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C PAU15P40585 124 aa6.81□□□□□ -1.32
NDE1YMR145C SDT1P53078 280 aa6.81□□□□□ -1.32
NDE1YMR145C CDC55Q00362 526 aa6.81□□□□□ -1.32
NDE1YMR145C YDR415CQ04033 374 aaPredicted RBP6.81□□□□□ -1.32
NDE1YMR145C TY1A-MR1Q04215 440 aa6.81□□□□□ -1.32
NDE1YMR145C IRC13Q08630 104 aa6.81□□□□□ -1.32
NDE1YMR145C GRE2Q12068 342 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C YRA1Q12159 226 aaKnown RBP6.81□□□□□ -1.32
NDE1YMR145C RPS25AQ3E792 108 aaPredicted RBP6.81□□□□□ -1.32
NDE1YMR145C TDH2P00358 332 aaKnown RBP6.8□□□□□ -1.32
NDE1YMR145C TDH3P00359 332 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
NDE1YMR145C SGF29P25554 259 aa6.8□□□□□ -1.32
NDE1YMR145C PBN1P25580 416 aa6.8□□□□□ -1.32
NDE1YMR145C OCH1P31755 480 aa6.8□□□□□ -1.32
NDE1YMR145C LDB7P38210 180 aa6.8□□□□□ -1.32
NDE1YMR145C YHL041WP38730 149 aa6.8□□□□□ -1.32
NDE1YMR145C GTS1P40956 396 aa6.8□□□□□ -1.32
NDE1YMR145C MIC26P50087 233 aa6.8□□□□□ -1.32
NDE1YMR145C RIB4P50861 169 aaPredicted RBP6.8□□□□□ -1.32
NDE1YMR145C EXG2P52911 562 aa6.8□□□□□ -1.32
NDE1YMR145C YGL138CP53122 345 aa6.8□□□□□ -1.32
NDE1YMR145C YNL092WP53934 400 aa6.8□□□□□ -1.32
NDE1YMR145C RCE1Q03530 315 aa6.8□□□□□ -1.32
NDE1YMR145C ERP1Q05359 219 aaKnown RBP6.8□□□□□ -1.32
NDE1YMR145C ACK1Q07622 623 aaPredicted RBP6.8□□□□□ -1.32
NDE1YMR145C SEC7P11075 2009 aaKnown RBP6.79□□□□□ -1.32
NDE1YMR145C ATP10P18496 279 aa6.79□□□□□ -1.32
NDE1YMR145C ANB1P19211 157 aa6.79□□□□□ -1.32
NDE1YMR145C ARP2P32381 391 aaKnown RBP6.79□□□□□ -1.32
NDE1YMR145C YKL151CP36059 337 aa6.79□□□□□ -1.32
NDE1YMR145C CBP4P37267 147 aa6.79□□□□□ -1.32
NDE1YMR145C YBR071WP38243 211 aa6.79□□□□□ -1.32
NDE1YMR145C CUE1P38428 203 aa6.79□□□□□ -1.32
NDE1YMR145C MET30P39014 640 aa6.79□□□□□ -1.32
NDE1YMR145C GPP2P40106 250 aaKnown RBP6.79□□□□□ -1.32
NDE1YMR145C YIL012WP40551 113 aa6.79□□□□□ -1.32
NDE1YMR145C YJL007CP47080 104 aa6.79□□□□□ -1.32
NDE1YMR145C TAH11P47112 604 aa6.79□□□□□ -1.32
NDE1YMR145C YIP4P53093 235 aa6.79□□□□□ -1.32
NDE1YMR145C THG1P53215 237 aaKnown RBP6.79□□□□□ -1.32
NDE1YMR145C NSG2P53898 299 aa6.79□□□□□ -1.32
NDE1YMR145C APS2Q00381 147 aa6.79□□□□□ -1.32
NDE1YMR145C RSM23Q01163 450 aa6.79□□□□□ -1.32
NDE1YMR145C GIP3Q03016 1276 aa6.79□□□□□ -1.32
NDE1YMR145C TMA23Q03525 211 aa6.79□□□□□ -1.32
NDE1YMR145C VBA1Q04301 562 aa6.79□□□□□ -1.32
NDE1YMR145C AGE1Q04412 482 aa6.79□□□□□ -1.32
NDE1YMR145C PAU23Q07987 124 aa6.79□□□□□ -1.32
NDE1YMR145C NDJ1Q12366 352 aa6.79□□□□□ -1.32
NDE1YMR145C PAU17Q12370 124 aa6.79□□□□□ -1.32
NDE1YMR145C TIM9O74700 87 aa6.78□□□□□ -1.32
NDE1YMR145C RPS28BP0C0X0 67 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C YER190C-BP0CX94 160 aa6.78□□□□□ -1.32
NDE1YMR145C YEL077W-AP0CX95 160 aa6.78□□□□□ -1.32
NDE1YMR145C YGR296C-BP0CX96 160 aa6.78□□□□□ -1.32
NDE1YMR145C YPL283W-BP0CX97 160 aa6.78□□□□□ -1.32
NDE1YMR145C YPR204C-AP0CX98 160 aa6.78□□□□□ -1.32
NDE1YMR145C BGL2P15703 313 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C MEK1P24719 497 aaPredicted RBP6.78□□□□□ -1.32
NDE1YMR145C IDH2P28241 369 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C HOM6P31116 359 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C NTF2P33331 125 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C SDH3P33421 198 aa6.78□□□□□ -1.32
NDE1YMR145C SCD5P34758 872 aa6.78□□□□□ -1.32
NDE1YMR145C ADH5P38113 351 aaKnown RBP6.78□□□□□ -1.32
NDE1YMR145C YHR177WP38867 453 aa6.78□□□□□ -1.32
NDE1YMR145C ASP1P38986 381 aaPredicted RBP6.78□□□□□ -1.32
NDE1YMR145C OYE3P41816 400 aaPredicted RBP6.78□□□□□ -1.32
NDE1YMR145C STE24P47154 453 aa6.78□□□□□ -1.32
NDE1YMR145C MTO1P53070 669 aa6.78□□□□□ -1.32
NDE1YMR145C NIF3P53081 288 aa6.78□□□□□ -1.32
NDE1YMR145C PLB2Q03674 706 aa6.78□□□□□ -1.32
NDE1YMR145C FIT1Q04433 528 aa6.78□□□□□ -1.32
NDE1YMR145C AVO2Q04749 426 aa6.78□□□□□ -1.32
NDE1YMR145C PAM18Q07914 168 aa6.78□□□□□ -1.32
NDE1YMR145C UBX3Q12229 455 aa6.78□□□□□ -1.32
NDE1YMR145C GEP5Q12393 293 aa6.78□□□□□ -1.32
NDE1YMR145C RPS28AQ3E7X9 67 aaPredicted RBP6.78□□□□□ -1.32
NDE1YMR145C PAI3P01094 68 aa6.77□□□□□ -1.32
NDE1YMR145C ART10P18634 518 aaKnown RBP6.77□□□□□ -1.32
NDE1YMR145C NPR1P22211 790 aa6.77□□□□□ -1.32
NDE1YMR145C FEN2P25621 512 aaKnown RBP6.77□□□□□ -1.32
NDE1YMR145C MRP17P28778 131 aa6.77□□□□□ -1.32
NDE1YMR145C UTR5P32630 166 aa6.77□□□□□ -1.32
NDE1YMR145C TOS1P38288 455 aa6.77□□□□□ -1.32
NDE1YMR145C ATG12P38316 186 aa6.77□□□□□ -1.32
NDE1YMR145C YHR097CP38809 366 aaKnown RBP6.77□□□□□ -1.32
NDE1YMR145C YFL052WP43551 465 aa6.77□□□□□ -1.32
NDE1YMR145C RPA43P46669 326 aa6.77□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms