RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YJL068CP40363 299 aa3.43□□□□□ -1.86
ECM16YMR128W QRI1P43123 477 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W MRX5P47007 382 aa3.43□□□□□ -1.86
ECM16YMR128W PFA4Q12006 378 aa3.43□□□□□ -1.86
ECM16YMR128W TPI1P00942 248 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W DPM1P14020 267 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W RPB3P16370 318 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W TAE1P38340 232 aa3.43□□□□□ -1.86
ECM16YMR128W FMP41P53889 259 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W ROY1Q04847 553 aa3.43□□□□□ -1.86
ECM16YMR128W HEM25Q07534 307 aa3.43□□□□□ -1.86
ECM16YMR128W RRT7Q07829 113 aa3.43□□□□□ -1.86
ECM16YMR128W YLR111WQ12528 110 aa3.43□□□□□ -1.86
ECM16YMR128W TDH2P00358 332 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W CHK1P38147 527 aa3.43□□□□□ -1.86
ECM16YMR128W ATG8P38182 117 aaRIP-Chip data3.43□□□□□ -1.86not detected
ECM16YMR128W IMD2P38697 523 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W FHN1P53279 174 aa3.43□□□□□ -1.86
ECM16YMR128W MMT2Q08970 484 aa3.43□□□□□ -1.86
ECM16YMR128W RAD28Q12021 506 aa3.43□□□□□ -1.86
ECM16YMR128W ODC2Q99297 307 aa3.43□□□□□ -1.86
ECM16YMR128W FUN19P28003 413 aaPredicted RBP3.42□□□□□ -1.86
ECM16YMR128W PRE2P30656 287 aaKnown RBP3.42□□□□□ -1.86
ECM16YMR128W MCM10P32354 571 aa3.42□□□□□ -1.86
ECM16YMR128W MDL1P33310 695 aa3.42□□□□□ -1.86
ECM16YMR128W YBR013CP38215 129 aa3.42□□□□□ -1.86
ECM16YMR128W RPP1P38786 293 aa3.42□□□□□ -1.86
ECM16YMR128W YGR012WP53206 393 aa3.42□□□□□ -1.86
ECM16YMR128W REC102Q02721 264 aa3.42□□□□□ -1.86
ECM16YMR128W SNA4Q07549 140 aa3.42□□□□□ -1.86
ECM16YMR128W RRI1Q12468 440 aa3.42□□□□□ -1.86
ECM16YMR128W NAM2P11325 894 aa3.42□□□□□ -1.86
ECM16YMR128W SIP1P32578 815 aa3.42□□□□□ -1.86
ECM16YMR128W ARO9P38840 513 aaPredicted RBP3.42□□□□□ -1.86
ECM16YMR128W ASP1P38986 381 aaPredicted RBP3.42□□□□□ -1.86
ECM16YMR128W LSM8P47093 109 aaKnown RBP3.42□□□□□ -1.86
ECM16YMR128W UBP8P50102 471 aa3.42□□□□□ -1.86
ECM16YMR128W CGR1P53188 120 aa3.42□□□□□ -1.86
ECM16YMR128W RSM27P53305 110 aa3.42□□□□□ -1.86
ECM16YMR128W YNR062CP53748 327 aa3.42□□□□□ -1.86
ECM16YMR128W YML096WQ04489 525 aa3.42□□□□□ -1.86
ECM16YMR128W YDL211CQ12121 372 aa3.42□□□□□ -1.86
ECM16YMR128W ERG1P32476 496 aaKnown RBP3.42□□□□□ -1.86
ECM16YMR128W ECM25P32525 599 aa3.42□□□□□ -1.86
ECM16YMR128W PAN3P36102 679 aaPredicted RBP3.42□□□□□ -1.86
ECM16YMR128W COS8P38723 381 aa3.42□□□□□ -1.86
ECM16YMR128W PUG1P40100 303 aa3.42□□□□□ -1.86
ECM16YMR128W DAN1P47178 298 aa3.42□□□□□ -1.86
ECM16YMR128W VPS62P53285 467 aa3.42□□□□□ -1.86
ECM16YMR128W YNR014WP53719 212 aa3.42□□□□□ -1.86
ECM16YMR128W PDR16P53860 351 aaKnown RBP3.42□□□□□ -1.86
ECM16YMR128W MRPL22P53881 309 aa3.42□□□□□ -1.86
ECM16YMR128W CAC2Q04199 468 aa3.42□□□□□ -1.86
ECM16YMR128W VBA4Q04602 768 aaKnown RBP3.42□□□□□ -1.86
ECM16YMR128W YPR127WQ06494 345 aa3.42□□□□□ -1.86
ECM16YMR128W SUL2Q12325 893 aa3.42□□□□□ -1.86
ECM16YMR128W IRA1P18963 3092 aa3.42□□□□□ -1.86
ECM16YMR128W HIS5P07172 385 aa3.41□□□□□ -1.86
ECM16YMR128W IFM1P25038 676 aa3.41□□□□□ -1.86
ECM16YMR128W MDH3P32419 343 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
ECM16YMR128W YNK1P36010 153 aaKnown RBP3.41□□□□□ -1.86
ECM16YMR128W MRPL37P36532 105 aa3.41□□□□□ -1.86
ECM16YMR128W ICE2P40499 491 aa3.41□□□□□ -1.86
ECM16YMR128W GNA1P43577 159 aaPredicted RBP3.41□□□□□ -1.86
ECM16YMR128W SFH5P47008 294 aa3.41□□□□□ -1.86
ECM16YMR128W YMR253CQ04835 414 aa3.41□□□□□ -1.86
ECM16YMR128W YDR286CQ05530 114 aa3.41□□□□□ -1.86
ECM16YMR128W PEX30Q06169 523 aa3.41□□□□□ -1.86
ECM16YMR128W ARR3Q06598 404 aa3.41□□□□□ -1.86
ECM16YMR128W FSH3Q99369 266 aa3.41□□□□□ -1.86
ECM16YMR128W POF1P25576 258 aa3.41□□□□□ -1.86
ECM16YMR128W ECM15P35195 104 aa3.41□□□□□ -1.86
ECM16YMR128W VPS51P36116 164 aa3.41□□□□□ -1.86
ECM16YMR128W SDS24P38314 527 aa3.41□□□□□ -1.86
ECM16YMR128W ANS1P38832 159 aa3.41□□□□□ -1.86
ECM16YMR128W LOH1P47055 219 aa3.41□□□□□ -1.86
ECM16YMR128W TPC1P53257 314 aa3.41□□□□□ -1.86
ECM16YMR128W HRT1Q08273 121 aa3.41□□□□□ -1.86
ECM16YMR128W YOR385WQ08909 290 aa3.41□□□□□ -1.86
ECM16YMR128W BTS1Q12051 335 aa3.41□□□□□ -1.86
ECM16YMR128W YOR114WQ12219 294 aa3.41□□□□□ -1.86
ECM16YMR128W QCR7P00128 127 aa3.41□□□□□ -1.86
ECM16YMR128W STE7P06784 515 aa3.41□□□□□ -1.86
ECM16YMR128W SEC12P11655 471 aa3.41□□□□□ -1.86
ECM16YMR128W YPK2P18961 677 aa3.41□□□□□ -1.86
ECM16YMR128W MCK1P21965 375 aaKnown RBP3.41□□□□□ -1.86
ECM16YMR128W OM14P38325 134 aa3.41□□□□□ -1.86
ECM16YMR128W ARC40P38328 384 aaKnown RBP3.41□□□□□ -1.86
ECM16YMR128W PRS2P38620 318 aaKnown RBP3.41□□□□□ -1.86
ECM16YMR128W VMA21P41806 77 aa3.41□□□□□ -1.86
ECM16YMR128W NIT3P49954 291 aa3.41□□□□□ -1.86
ECM16YMR128W ACS1Q01574 713 aa3.41□□□□□ -1.86
ECM16YMR128W BER1Q06688 274 aaKnown RBP3.41□□□□□ -1.86
ECM16YMR128W ORT1Q12375 292 aa3.41□□□□□ -1.86
ECM16YMR128W MSB2P32334 1306 aa3.41□□□□□ -1.86
ECM16YMR128W YBL010CP32788 280 aa3.4□□□□□ -1.86
ECM16YMR128W DED81P38707 554 aaKnown RBP3.4□□□□□ -1.86
ECM16YMR128W RRP3P38712 501 aaKnown RBP3.4□□□□□ -1.86
ECM16YMR128W PTC7P38797 343 aa3.4□□□□□ -1.86
ECM16YMR128W RTC3P38804 111 aaPredicted RBP3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 158.1 ms