RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C AIM17P23180 465 aaKnown RBP4.4□□□□□ -1.7
NUP116YMR047C ATG15P25641 520 aa4.4□□□□□ -1.7
NUP116YMR047C FMP23P38231 175 aa4.4□□□□□ -1.7
NUP116YMR047C ICS2P38284 255 aa4.4□□□□□ -1.7
NUP116YMR047C NQM1P53228 333 aaPredicted RBP4.4□□□□□ -1.7
NUP116YMR047C YIP3P53633 176 aa4.4□□□□□ -1.7
NUP116YMR047C YLR460CP54007 376 aa4.4□□□□□ -1.7
NUP116YMR047C CTS2Q06350 511 aa4.4□□□□□ -1.7
NUP116YMR047C YLR040CQ07988 224 aa4.4□□□□□ -1.7
NUP116YMR047C APC9Q12107 265 aa4.4□□□□□ -1.7
NUP116YMR047C MAG1P22134 296 aaKnown RBP4.4□□□□□ -1.71
NUP116YMR047C PHD1P36093 366 aa4.4□□□□□ -1.71
NUP116YMR047C MNN5P46982 586 aa4.4□□□□□ -1.71
NUP116YMR047C YGR079WP53249 370 aa4.4□□□□□ -1.71
NUP116YMR047C SAE3P89114 91 aa4.4□□□□□ -1.71
NUP116YMR047C OAZ1Q02803 292 aa4.4□□□□□ -1.71
NUP116YMR047C SHH3Q04487 196 aa4.4□□□□□ -1.71
NUP116YMR047C GTO3Q04806 366 aa4.4□□□□□ -1.71
NUP116YMR047C DCP1Q12517 231 aaPredicted RBP4.4□□□□□ -1.71
NUP116YMR047C PEX4P29340 183 aa4.39□□□□□ -1.71
NUP116YMR047C YSC84P32793 468 aa4.39□□□□□ -1.71
NUP116YMR047C ECM8P38246 354 aa4.39□□□□□ -1.71
NUP116YMR047C YHK8P38776 514 aa4.39□□□□□ -1.71
NUP116YMR047C IPI1P38803 334 aaPredicted RBP4.39□□□□□ -1.71
NUP116YMR047C RPL10P41805 221 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C RPA34P47006 233 aaPredicted RBP4.39□□□□□ -1.71
NUP116YMR047C YGR126WP53274 230 aa4.39□□□□□ -1.71
NUP116YMR047C NUP49Q02199 472 aa4.39□□□□□ -1.71
NUP116YMR047C DYN2Q02647 92 aa4.39□□□□□ -1.71
NUP116YMR047C PFA5Q03289 374 aa4.39□□□□□ -1.71
NUP116YMR047C GIS1Q03833 894 aa4.39□□□□□ -1.71
NUP116YMR047C NOC4Q06512 552 aaPredicted RBP4.39□□□□□ -1.71
NUP116YMR047C SPC3Q12133 184 aa4.39□□□□□ -1.71
NUP116YMR047C PCC1Q3E833 88 aa4.39□□□□□ -1.71
NUP116YMR047C FLO9P39712 1322 aa4.39□□□□□ -1.71
NUP116YMR047C YBR085C-AO43137 85 aa4.39□□□□□ -1.71
NUP116YMR047C CAR1P00812 333 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C TPI1P00942 248 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C RPL3P14126 387 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C YCK1P23291 538 aa4.39□□□□□ -1.71
NUP116YMR047C NUD1P32336 851 aa4.39□□□□□ -1.71
NUP116YMR047C FLO10P36170 1169 aa4.39□□□□□ -1.71
NUP116YMR047C MLH1P38920 769 aa4.39□□□□□ -1.71
NUP116YMR047C MUP1P50276 574 aa4.39□□□□□ -1.71
NUP116YMR047C ATG4P53867 494 aa4.39□□□□□ -1.71
NUP116YMR047C YNL010WP53981 241 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C TIM44Q01852 431 aa4.39□□□□□ -1.71
NUP116YMR047C YPL108WQ02872 168 aaPredicted RBP4.39□□□□□ -1.71
NUP116YMR047C RNH202Q05635 350 aa4.39□□□□□ -1.71
NUP116YMR047C YPR064WQ12492 139 aa4.39□□□□□ -1.71
NUP116YMR047C TPK2P06245 380 aa4.39□□□□□ -1.71
NUP116YMR047C ERD1P16151 362 aa4.39□□□□□ -1.71
NUP116YMR047C FUN14P18411 198 aa4.39□□□□□ -1.71
NUP116YMR047C MSN1P22148 382 aa4.39□□□□□ -1.71
NUP116YMR047C RPL24BP24000 155 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C CYS4P32582 507 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C GOS1P38736 223 aa4.39□□□□□ -1.71
NUP116YMR047C PDR16P53860 351 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C TY1A-MR1Q04215 440 aa4.39□□□□□ -1.71
NUP116YMR047C YMR226CQ05016 267 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C HOF1Q05080 669 aa4.39□□□□□ -1.71
NUP116YMR047C HRI1Q05905 244 aaKnown RBP4.39□□□□□ -1.71
NUP116YMR047C FDH1Q08911 376 aa4.39□□□□□ -1.71
NUP116YMR047C RRI1Q12468 440 aa4.39□□□□□ -1.71
NUP116YMR047C YLR361C-AQ3E795 98 aa4.39□□□□□ -1.71
NUP116YMR047C TAD3Q9URQ3 322 aa4.39□□□□□ -1.71
NUP116YMR047C HFA1P32874 2273 aa4.38□□□□□ -1.71
NUP116YMR047C HAP4P14064 554 aa4.38□□□□□ -1.71
NUP116YMR047C MXR2P25566 168 aa4.38□□□□□ -1.71
NUP116YMR047C THI4P32318 326 aa4.38□□□□□ -1.71
NUP116YMR047C ZTA1P38230 334 aaKnown RBP4.38□□□□□ -1.71
NUP116YMR047C YBR197CP38306 217 aa4.38□□□□□ -1.71
NUP116YMR047C QRI7P43122 407 aa4.38□□□□□ -1.71
NUP116YMR047C SAM37P50110 327 aa4.38□□□□□ -1.71
NUP116YMR047C ACS2P52910 683 aaKnown RBP4.38□□□□□ -1.71
NUP116YMR047C YGR017WP53210 297 aa4.38□□□□□ -1.71
NUP116YMR047C YNL092WP53934 400 aa4.38□□□□□ -1.71
NUP116YMR047C SMX3P54999 86 aaPredicted RBP4.38□□□□□ -1.71
NUP116YMR047C MRX9Q07349 420 aaKnown RBP4.38□□□□□ -1.71
NUP116YMR047C YDL218WQ07629 317 aa4.38□□□□□ -1.71
NUP116YMR047C RKI1Q12189 258 aa4.38□□□□□ -1.71
NUP116YMR047C PET20Q99373 253 aa4.38□□□□□ -1.71
NUP116YMR047C COX2P00410 251 aa4.38□□□□□ -1.71
NUP116YMR047C REP2P03872 296 aa4.38□□□□□ -1.71
NUP116YMR047C COQ3P27680 312 aa4.38□□□□□ -1.71
NUP116YMR047C CBP4P37267 147 aa4.38□□□□□ -1.71
NUP116YMR047C ERV15P38312 142 aa4.38□□□□□ -1.71
NUP116YMR047C MGE1P38523 228 aa4.38□□□□□ -1.71
NUP116YMR047C FAA2P39518 744 aa4.38□□□□□ -1.71
NUP116YMR047C VNX1P42839 908 aa4.38□□□□□ -1.71
NUP116YMR047C YCH1P42937 148 aa4.38□□□□□ -1.71
NUP116YMR047C BIT61P47041 543 aa4.38□□□□□ -1.71
NUP116YMR047C MSC1Q03104 513 aa4.38□□□□□ -1.71
NUP116YMR047C CSI2Q08054 341 aa4.38□□□□□ -1.71
NUP116YMR047C PEX27Q08580 376 aa4.38□□□□□ -1.71
NUP116YMR047C TY1A-BLQ12266 440 aa4.38□□□□□ -1.71
NUP116YMR047C YPR1Q12458 312 aa4.38□□□□□ -1.71
NUP116YMR047C YKL018C-AQ3E7A7 99 aa4.38□□□□□ -1.71
NUP116YMR047C SEC59P20048 519 aa4.38□□□□□ -1.71
NUP116YMR047C RPS1BP23248 255 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms