RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C ZWF1P11412 505 aaKnown RBP1.05□□□□□ -2.24
NUP188YML103C AST1P35183 429 aa1.05□□□□□ -2.24
NUP188YML103C YKL075CP36083 450 aa1.05□□□□□ -2.24
NUP188YML103C YPC1P38298 316 aa1.05□□□□□ -2.24
NUP188YML103C SIP3P38717 1229 aa1.05□□□□□ -2.24
NUP188YML103C EGD2P38879 174 aaKnown RBP1.05□□□□□ -2.24
NUP188YML103C KRE9P39005 276 aa1.05□□□□□ -2.24
NUP188YML103C YRB2P40517 327 aa1.05□□□□□ -2.24
NUP188YML103C PEX31P53203 462 aa1.05□□□□□ -2.24
NUP188YML103C TPC1P53257 314 aa1.05□□□□□ -2.24
NUP188YML103C MAL13P53338 473 aa1.05□□□□□ -2.24
NUP188YML103C CUS2P53830 285 aaPredicted RBP1.05□□□□□ -2.24
NUP188YML103C AAH1P53909 347 aa1.05□□□□□ -2.24
NUP188YML103C HAL1Q01766 294 aa1.05□□□□□ -2.24
NUP188YML103C RPL27AP0C2H6 136 aaKnown RBP1.05□□□□□ -2.24
NUP188YML103C RPL27BP0C2H7 136 aaKnown RBP1.05□□□□□ -2.24
NUP188YML103C YOL163WP0CF20 169 aa1.05□□□□□ -2.24
NUP188YML103C PRX1P34227 261 aaKnown RBP1.05□□□□□ -2.24
NUP188YML103C NOP13P53883 403 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
NUP188YML103C SDC1Q03323 175 aa1.05□□□□□ -2.24
NUP188YML103C SPG4Q04438 115 aa1.05□□□□□ -2.24
NUP188YML103C DOA4P32571 926 aa1.05□□□□□ -2.24
NUP188YML103C TRM5P38793 499 aa1.05□□□□□ -2.24
NUP188YML103C SYS1P41544 203 aa1.05□□□□□ -2.24
NUP188YML103C YJL118WP47022 219 aa1.05□□□□□ -2.24
NUP188YML103C NBP1P52919 319 aaPredicted RBP1.05□□□□□ -2.24
NUP188YML103C ABF2Q02486 183 aa1.05□□□□□ -2.24
NUP188YML103C IES3Q12345 250 aa1.05□□□□□ -2.24
NUP188YML103C AUS1Q08409 1394 aa1.04□□□□□ -2.24
NUP188YML103C SPS100P13130 326 aa1.04□□□□□ -2.24
NUP188YML103C FUS3P16892 353 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C RPT5P33297 434 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C GPX1P36014 167 aa1.04□□□□□ -2.24
NUP188YML103C LDB7P38210 180 aa1.04□□□□□ -2.24
NUP188YML103C COS8P38723 381 aa1.04□□□□□ -2.24
NUP188YML103C SUR2P38992 349 aa1.04□□□□□ -2.24
NUP188YML103C YER189WP40104 122 aa1.04□□□□□ -2.24
NUP188YML103C YJR079WP47126 109 aa1.04□□□□□ -2.24
NUP188YML103C UFD1P53044 361 aa1.04□□□□□ -2.24
NUP188YML103C FLC3P53121 802 aa1.04□□□□□ -2.24
NUP188YML103C FMP48P53233 369 aa1.04□□□□□ -2.24
NUP188YML103C SWS2P53937 143 aa1.04□□□□□ -2.24
NUP188YML103C MYO5Q04439 1219 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C YOR029WQ12243 111 aa1.04□□□□□ -2.24
NUP188YML103C RAX2Q12465 1220 aa1.04□□□□□ -2.24
NUP188YML103C YPL119C-AQ3E751 87 aa1.04□□□□□ -2.24
NUP188YML103C NUP157P40064 1391 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C YKR104WP0CE69 306 aa1.04□□□□□ -2.24
NUP188YML103C IDH1P28834 360 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
NUP188YML103C MGM101P32787 269 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C SFC1P33303 322 aa1.04□□□□□ -2.24
NUP188YML103C PRY2P36110 329 aa1.04□□□□□ -2.24
NUP188YML103C FRM2P37261 193 aa1.04□□□□□ -2.24
NUP188YML103C TRM7P38238 310 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C IRC18P47056 224 aa1.04□□□□□ -2.24
NUP188YML103C CAX4P53223 239 aa1.04□□□□□ -2.24
NUP188YML103C SWT21P53873 357 aaPredicted RBP1.04□□□□□ -2.24
NUP188YML103C YNL095CP53932 642 aa1.04□□□□□ -2.24
NUP188YML103C TLG1Q03322 224 aa1.04□□□□□ -2.24
NUP188YML103C EBS1Q03466 884 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C CDC123Q05791 360 aa1.04□□□□□ -2.24
NUP188YML103C QRI5P32344 111 aa1.04□□□□□ -2.24
NUP188YML103C YPT52P36018 234 aaKnown RBP1.04□□□□□ -2.24
NUP188YML103C JEN1P36035 616 aa1.04□□□□□ -2.24
NUP188YML103C HMT1P38074 348 aa1.04□□□□□ -2.24
NUP188YML103C YJR056CP47115 236 aa1.04□□□□□ -2.24
NUP188YML103C JHD2P47156 728 aaPredicted RBP1.04□□□□□ -2.24
NUP188YML103C YJR141WP47172 347 aaPredicted RBP1.04□□□□□ -2.24
NUP188YML103C NBP35P52920 328 aa1.04□□□□□ -2.24
NUP188YML103C TY3A-GQ12173 290 aa1.04□□□□□ -2.24
NUP188YML103C JLP1Q12358 412 aa1.04□□□□□ -2.24
NUP188YML103C YOR020W-AQ3E824 90 aa1.04□□□□□ -2.24
NUP188YML103C TY3A-IQ99219 290 aa1.04□□□□□ -2.24
NUP188YML103C DRS2P39524 1355 aa1.04□□□□□ -2.24
NUP188YML103C YAK1P14680 807 aa1.04□□□□□ -2.24
NUP188YML103C ZRT3P34240 503 aa1.04□□□□□ -2.24
NUP188YML103C POP8P38208 133 aa1.04□□□□□ -2.24
NUP188YML103C SPL2P38839 148 aa1.04□□□□□ -2.24
NUP188YML103C FAR7P43592 221 aa1.04□□□□□ -2.24
NUP188YML103C SMD1Q02260 146 aaPredicted RBP1.04□□□□□ -2.24
NUP188YML103C INP1Q03694 420 aa1.04□□□□□ -2.24
NUP188YML103C FAR8Q05040 523 aa1.04□□□□□ -2.24
NUP188YML103C TAZ1Q06510 381 aa1.04□□□□□ -2.24
NUP188YML103C YPL278CQ08990 100 aa1.04□□□□□ -2.24
NUP188YML103C THP2O13539 261 aaKnown RBP1.03□□□□□ -2.24
NUP188YML103C PPH21P23594 369 aa1.03□□□□□ -2.24
NUP188YML103C GDH2P33327 1092 aaKnown RBP1.03□□□□□ -2.24
NUP188YML103C DBP7P36120 742 aaKnown RBP1.03□□□□□ -2.24
NUP188YML103C NUP57P48837 541 aa1.03□□□□□ -2.24
NUP188YML103C MRS2Q01926 470 aa1.03□□□□□ -2.24
NUP188YML103C YOL029CQ08187 201 aa1.03□□□□□ -2.24
NUP188YML103C SLD7Q08457 257 aa1.03□□□□□ -2.24
NUP188YML103C YDL211CQ12121 372 aa1.03□□□□□ -2.24
NUP188YML103C PST1Q12355 444 aa1.03□□□□□ -2.24
NUP188YML103C PET8P38921 284 aa1.03□□□□□ -2.24
NUP188YML103C MGA1P53050 456 aa1.03□□□□□ -2.24
NUP188YML103C PRM8P53174 237 aa1.03□□□□□ -2.24
NUP188YML103C HOP2P53187 214 aa1.03□□□□□ -2.24
NUP188YML103C YMD8Q03697 442 aa1.03□□□□□ -2.24
NUP188YML103C PIN3Q06449 215 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms