RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W CBP6P07253 162 aaPredicted RBP3.92□□□□□ -1.78
VPS36YLR417W DAL81P21657 970 aa3.92□□□□□ -1.78
VPS36YLR417W CDC13P32797 924 aaKnown RBP3.92□□□□□ -1.78
VPS36YLR417W YBR062CP38239 180 aa3.92□□□□□ -1.78
VPS36YLR417W GVP36P40531 326 aaKnown RBP3.92□□□□□ -1.78
VPS36YLR417W GCN20P43535 752 aaKnown RBP3.92□□□□□ -1.78
VPS36YLR417W IBA57P47158 497 aa3.92□□□□□ -1.78
VPS36YLR417W CDC14Q00684 551 aa3.92□□□□□ -1.78
VPS36YLR417W OST6Q03723 332 aa3.92□□□□□ -1.78
VPS36YLR417W YML018CQ03730 393 aa3.92□□□□□ -1.78
VPS36YLR417W TSA2Q04120 196 aa3.92□□□□□ -1.78
VPS36YLR417W PER33Q12144 273 aa3.92□□□□□ -1.78
VPS36YLR417W YRF1-1P0CX20 1796 aa3.92□□□□□ -1.78
VPS36YLR417W YRF1-5P0CX21 1796 aa3.92□□□□□ -1.78
VPS36YLR417W YRF1-8P0CX22 1796 aa3.92□□□□□ -1.78
VPS36YLR417W REV1P12689 985 aa3.92□□□□□ -1.78
VPS36YLR417W PCL1P24867 279 aa3.92□□□□□ -1.78
VPS36YLR417W POF1P25576 258 aa3.92□□□□□ -1.78
VPS36YLR417W ZIP1P31111 875 aa3.92□□□□□ -1.78
VPS36YLR417W VPH2P32341 215 aa3.92□□□□□ -1.78
VPS36YLR417W ARO4P32449 370 aaKnown RBP3.92□□□□□ -1.78
VPS36YLR417W HEK2P38199 381 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
VPS36YLR417W FZO1P38297 855 aa3.92□□□□□ -1.78
VPS36YLR417W BIG1P38813 335 aa3.92□□□□□ -1.78
VPS36YLR417W PEX31P53203 462 aa3.92□□□□□ -1.78
VPS36YLR417W MNT4P53745 580 aa3.92□□□□□ -1.78
VPS36YLR417W PET117Q02771 107 aa3.92□□□□□ -1.78
VPS36YLR417W ARO80Q04052 950 aa3.92□□□□□ -1.78
VPS36YLR417W ARV1Q06541 321 aa3.92□□□□□ -1.78
VPS36YLR417W DAS2Q12084 232 aa3.92□□□□□ -1.78
VPS36YLR417W PET494P07390 489 aaPredicted RBP3.91□□□□□ -1.78
VPS36YLR417W RRG9P40156 214 aa3.91□□□□□ -1.78
VPS36YLR417W RTC4P53850 401 aa3.91□□□□□ -1.78
VPS36YLR417W INP1Q03694 420 aa3.91□□□□□ -1.78
VPS36YLR417W ATG17Q06410 417 aa3.91□□□□□ -1.78
VPS36YLR417W TRM10Q12400 293 aa3.91□□□□□ -1.78
VPS36YLR417W ATG31Q12421 196 aa3.91□□□□□ -1.78
VPS36YLR417W BMH2P34730 273 aaKnown RBP3.9□□□□□ -1.78
VPS36YLR417W MBA1P38300 278 aa3.9□□□□□ -1.78
VPS36YLR417W ECM34P38728 170 aa3.9□□□□□ -1.78
VPS36YLR417W SHC1P39000 512 aa3.9□□□□□ -1.78
VPS36YLR417W RRT13P40042 185 aa3.9□□□□□ -1.78
VPS36YLR417W ASG7P46993 209 aa3.9□□□□□ -1.78
VPS36YLR417W CTR3Q06686 241 aa3.9□□□□□ -1.78
VPS36YLR417W YOR029WQ12243 111 aa3.9□□□□□ -1.78
VPS36YLR417W RAX2Q12465 1220 aa3.9□□□□□ -1.78
VPS36YLR417W RPS3P05750 240 aaKnown RBP3.9□□□□□ -1.79
VPS36YLR417W FRM2P37261 193 aa3.9□□□□□ -1.79
VPS36YLR417W PRS2P38620 318 aaKnown RBP3.9□□□□□ -1.79
VPS36YLR417W RPL10P41805 221 aaKnown RBP3.9□□□□□ -1.79
VPS36YLR417W TIM21P53220 239 aa3.9□□□□□ -1.79
VPS36YLR417W RNY1Q02933 434 aaKnown RBP3.9□□□□□ -1.79
VPS36YLR417W SEC10Q06245 871 aa3.9□□□□□ -1.79
VPS36YLR417W MCH1Q07376 486 aa3.9□□□□□ -1.79
VPS36YLR417W PAM18Q07914 168 aa3.9□□□□□ -1.79
VPS36YLR417W YOL029CQ08187 201 aa3.9□□□□□ -1.79
VPS36YLR417W SME1Q12330 94 aaPredicted RBP3.9□□□□□ -1.79
VPS36YLR417W OCA6Q12454 224 aa3.9□□□□□ -1.79
VPS36YLR417W SEY1Q99287 776 aa3.9□□□□□ -1.79
VPS36YLR417W TPI1P00942 248 aaKnown RBP3.89□□□□□ -1.79
VPS36YLR417W NUF2P33895 451 aa3.89□□□□□ -1.79
VPS36YLR417W YOX1P34161 385 aa3.89□□□□□ -1.79
VPS36YLR417W YET1P35723 206 aa3.89□□□□□ -1.79
VPS36YLR417W UTH1P36135 365 aa3.89□□□□□ -1.79
VPS36YLR417W SRL3P36167 246 aa3.89□□□□□ -1.79
VPS36YLR417W YFL064CP43540 174 aa3.89□□□□□ -1.79
VPS36YLR417W HOP2P53187 214 aa3.89□□□□□ -1.79
VPS36YLR417W COG7P53195 279 aa3.89□□□□□ -1.79
VPS36YLR417W EBS1Q03466 884 aaKnown RBP3.89□□□□□ -1.79
VPS36YLR417W UTP15Q04305 513 aaKnown RBP3.89□□□□□ -1.79
VPS36YLR417W RSF2P46974 1380 aa3.89□□□□□ -1.79
VPS36YLR417W YAL064W-BO13512 126 aa3.88□□□□□ -1.79
VPS36YLR417W AIM29P36154 155 aa3.88□□□□□ -1.79
VPS36YLR417W MRPL3P36516 390 aa3.88□□□□□ -1.79
VPS36YLR417W LIF1P53150 421 aa3.88□□□□□ -1.79
VPS36YLR417W YGR018CP53211 109 aa3.88□□□□□ -1.79
VPS36YLR417W MRPL50P53724 139 aa3.88□□□□□ -1.79
VPS36YLR417W YMR244WQ04018 355 aa3.88□□□□□ -1.79
VPS36YLR417W MSH5Q12175 901 aa3.88□□□□□ -1.79
VPS36YLR417W YAL067W-AQ8TGK6 75 aa3.88□□□□□ -1.79
VPS36YLR417W YOL085CQ99345 113 aa3.88□□□□□ -1.79
VPS36YLR417W ADH1P00330 348 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W YCR016WP25617 290 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W PEX3P28795 441 aa3.87□□□□□ -1.79
VPS36YLR417W TPS2P31688 896 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W ZRT3P34240 503 aa3.87□□□□□ -1.79
VPS36YLR417W ECM4P36156 370 aa3.87□□□□□ -1.79
VPS36YLR417W MRX3P38172 270 aa3.87□□□□□ -1.79
VPS36YLR417W BFR1P38934 470 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
VPS36YLR417W YER085CP40058 173 aa3.87□□□□□ -1.79
VPS36YLR417W YRB1P41920 201 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W RPC17P47076 161 aa3.87□□□□□ -1.79
VPS36YLR417W RPL22BP56628 122 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W YLR283WQ05867 314 aa3.87□□□□□ -1.79
VPS36YLR417W YPL278CQ08990 100 aa3.87□□□□□ -1.79
VPS36YLR417W DUR1,2P32528 1835 aaKnown RBP3.87□□□□□ -1.79
VPS36YLR417W SNA3P14359 133 aa3.87□□□□□ -1.79
VPS36YLR417W ALK2P32789 676 aaPredicted RBP3.87□□□□□ -1.79
VPS36YLR417W FES1P38260 290 aa3.87□□□□□ -1.79
VPS36YLR417W ATG12P38316 186 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms