RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C GRH1Q04410 372 aaKnown RBP1.53□□□□□ -2.16
CMS1YLR003C LOA1Q06508 300 aa1.53□□□□□ -2.16
CMS1YLR003C BTS1Q12051 335 aa1.53□□□□□ -2.16
CMS1YLR003C YOL107WQ12239 342 aa1.53□□□□□ -2.16
CMS1YLR003C YBL112CQ3E7Y4 105 aa1.53□□□□□ -2.16
CMS1YLR003C DPB2P24482 689 aaPredicted RBP1.52□□□□□ -2.17
CMS1YLR003C YHL049CP38722 271 aa1.52□□□□□ -2.17
CMS1YLR003C DDI1P40087 428 aa1.52□□□□□ -2.17
CMS1YLR003C YJL028WP47062 111 aa1.52□□□□□ -2.17
CMS1YLR003C YJR141WP47172 347 aaPredicted RBP1.52□□□□□ -2.17
CMS1YLR003C KAP114P53067 1004 aa1.52□□□□□ -2.17
CMS1YLR003C MNT4P53745 580 aa1.52□□□□□ -2.17
CMS1YLR003C EBS1Q03466 884 aaKnown RBP1.52□□□□□ -2.17
CMS1YLR003C ADH6Q04894 360 aaKnown RBP1.52□□□□□ -2.17
CMS1YLR003C PLB3Q08108 686 aa1.52□□□□□ -2.17
CMS1YLR003C RNP1P32385 249 aa1.51□□□□□ -2.17
CMS1YLR003C SPT8P38915 602 aa1.51□□□□□ -2.17
CMS1YLR003C GON7P46984 123 aa1.51□□□□□ -2.17
CMS1YLR003C OST3P48439 350 aa1.51□□□□□ -2.17
CMS1YLR003C MAL13P53338 473 aa1.51□□□□□ -2.17
CMS1YLR003C ATC1Q04005 294 aa1.51□□□□□ -2.17
CMS1YLR003C BOP2Q06150 570 aa1.51□□□□□ -2.17
CMS1YLR003C YLR179CQ06252 201 aaKnown RBP1.51□□□□□ -2.17
CMS1YLR003C SUE1Q06524 206 aa1.51□□□□□ -2.17
CMS1YLR003C YPR011CQ12251 326 aa1.51□□□□□ -2.17
CMS1YLR003C AGC1Q12482 902 aa1.51□□□□□ -2.17
CMS1YLR003C SNF6P18888 332 aa1.5□□□□□ -2.17
CMS1YLR003C CWP1P28319 239 aa1.5□□□□□ -2.17
CMS1YLR003C SSH1P38353 490 aaKnown RBP1.5□□□□□ -2.17
CMS1YLR003C PRM9P39551 298 aa1.5□□□□□ -2.17
CMS1YLR003C NBP35P52920 328 aa1.5□□□□□ -2.17
CMS1YLR003C SWS2P53937 143 aa1.5□□□□□ -2.17
CMS1YLR003C ALG11P53954 548 aaKnown RBP1.5□□□□□ -2.17
CMS1YLR003C EMI1Q04406 187 aa1.5□□□□□ -2.17
CMS1YLR003C FCF1Q05498 189 aaPredicted RBP1.5□□□□□ -2.17
CMS1YLR003C SME1Q12330 94 aaPredicted RBP1.5□□□□□ -2.17
CMS1YLR003C YBL008W-AQ3E821 79 aa1.5□□□□□ -2.17
CMS1YLR003C RAD3P06839 778 aa1.49□□□□□ -2.17
CMS1YLR003C POX1P13711 748 aa1.49□□□□□ -2.17
CMS1YLR003C DAL82P21705 255 aa1.49□□□□□ -2.17
CMS1YLR003C TOM40P23644 387 aaKnown RBP1.49□□□□□ -2.17
CMS1YLR003C QRI5P32344 111 aa1.49□□□□□ -2.17
CMS1YLR003C YGP1P38616 354 aaKnown RBP1.49□□□□□ -2.17
CMS1YLR003C TEM1P38987 245 aa1.49□□□□□ -2.17
CMS1YLR003C RPL10P41805 221 aaKnown RBP1.49□□□□□ -2.17
CMS1YLR003C AAH1P53909 347 aa1.49□□□□□ -2.17
CMS1YLR003C ASI3P53983 676 aa1.49□□□□□ -2.17
CMS1YLR003C YMR114CQ04471 368 aaKnown RBP1.49□□□□□ -2.17
CMS1YLR003C SPO77Q06134 477 aa1.49□□□□□ -2.17
CMS1YLR003C CTS2Q06350 511 aa1.49□□□□□ -2.17
CMS1YLR003C YPR147CQ06522 304 aaKnown RBP1.49□□□□□ -2.17
CMS1YLR003C GEP5Q12393 293 aa1.49□□□□□ -2.17
CMS1YLR003C YPL247CQ12523 523 aa1.49□□□□□ -2.17
CMS1YLR003C COX2P00410 251 aa1.48□□□□□ -2.17
CMS1YLR003C SGE1P33335 543 aa1.48□□□□□ -2.17
CMS1YLR003C YUH1P35127 236 aa1.48□□□□□ -2.17
CMS1YLR003C BIG1P38813 335 aa1.48□□□□□ -2.17
CMS1YLR003C AGX1P43567 385 aa1.48□□□□□ -2.17
CMS1YLR003C MDM34P53083 459 aa1.48□□□□□ -2.17
CMS1YLR003C SLM2P53955 656 aa1.48□□□□□ -2.17
CMS1YLR003C MYO5Q04439 1219 aaKnown RBP1.48□□□□□ -2.17
CMS1YLR003C TY3A-GQ12173 290 aa1.48□□□□□ -2.17
CMS1YLR003C BBP1Q12365 385 aa1.48□□□□□ -2.17
CMS1YLR003C TY3A-IQ99219 290 aa1.48□□□□□ -2.17
CMS1YLR003C INO80P53115 1489 aa1.48□□□□□ -2.17
CMS1YLR003C SWI1P09547 1314 aa1.47□□□□□ -2.17
CMS1YLR003C POL30P15873 258 aaKnown RBP1.47□□□□□ -2.17
CMS1YLR003C VPS3P23643 1011 aa1.47□□□□□ -2.17
CMS1YLR003C JEN1P36035 616 aa1.47□□□□□ -2.17
CMS1YLR003C PRS2P38620 318 aaKnown RBP1.47□□□□□ -2.17
CMS1YLR003C BNA6P43619 295 aa1.47□□□□□ -2.17
CMS1YLR003C RHO3Q00245 231 aaKnown RBP1.47□□□□□ -2.17
CMS1YLR003C KAP95Q06142 861 aaKnown RBP1.47□□□□□ -2.17
CMS1YLR003C ATG17Q06410 417 aa1.47□□□□□ -2.17
CMS1YLR003C YOR268CQ08734 132 aa1.47□□□□□ -2.17
CMS1YLR003C COS2P0CX12 379 aa1.46□□□□□ -2.18
CMS1YLR003C COS3P0CX13 379 aa1.46□□□□□ -2.18
CMS1YLR003C RSR1P13856 272 aa1.46□□□□□ -2.18
CMS1YLR003C SEC22P22214 214 aa1.46□□□□□ -2.18
CMS1YLR003C GDH2P33327 1092 aaKnown RBP1.46□□□□□ -2.18
CMS1YLR003C YHR045WP38775 560 aa1.46□□□□□ -2.18
CMS1YLR003C DSN1P40568 576 aa1.46□□□□□ -2.18
CMS1YLR003C YJR146WP47174 117 aa1.46□□□□□ -2.18
CMS1YLR003C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
CMS1YLR003C GOT1Q03554 138 aa1.46□□□□□ -2.18
CMS1YLR003C YPR098CQ06089 161 aa1.46□□□□□ -2.18
CMS1YLR003C RRT8Q08219 342 aa1.46□□□□□ -2.18
CMS1YLR003C RRP40Q08285 240 aaKnown RBP1.46□□□□□ -2.18
CMS1YLR003C RRS1Q08746 203 aaKnown RBP1.46□□□□□ -2.18
CMS1YLR003C SMT3Q12306 101 aaKnown RBP1.46□□□□□ -2.18
CMS1YLR003C RRP36Q12481 300 aaPredicted RBP1.46□□□□□ -2.18
CMS1YLR003C BEM2P39960 2167 aaKnown RBP1.45□□□□□ -2.18
CMS1YLR003C YKR104WP0CE69 306 aa1.45□□□□□ -2.18
CMS1YLR003C MRPL39P36533 70 aa1.45□□□□□ -2.18
CMS1YLR003C PET100P38958 111 aa1.45□□□□□ -2.18
CMS1YLR003C SNZ3P43545 298 aa1.45□□□□□ -2.18
CMS1YLR003C MNN5P46982 586 aa1.45□□□□□ -2.18
CMS1YLR003C USE1P53146 245 aa1.45□□□□□ -2.18
CMS1YLR003C YDR124WQ04608 324 aa1.45□□□□□ -2.18
CMS1YLR003C YOR029WQ12243 111 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms