RNA–Protein interactions for RNA: YKR050W

TRK2, Transcript of Component of the Trk1p-Trk2p potassium transport system, yeast

Gene TRK2, Length 2,670 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRK2	YKR050W	CNE1	P27825	502 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	ATS1	P31386	333 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	SOF1	P33750	489 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	MSY1	P48527	492 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	MCH4	Q08268	501 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	YPL278C	Q08990	100 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	RTR2	Q12378	196 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	IRA1	P18963	3092 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	GCD1	P09032	578 aa	Predicted RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	ERG4	P25340	473 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	RPS26A	P39938	119 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	RPS26B	P39939	119 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	SMB1	P40018	196 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	YIL169C	P40442	995 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	YIL077C	P40508	320 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	YKE4	P40544	346 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	PRY1	P47032	299 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	NUP42	P49686	430 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	SLI1	P53304	468 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	GIM3	P53900	129 aa		4.87	□□□□□ -1.63
TRK2	YKR050W	DIG2	Q03373	323 aa	Known RBP	4.87	□□□□□ -1.63
TRK2	YKR050W	CBP6	P07253	162 aa	Predicted RBP	4.86	□□□□□ -1.63
TRK2	YKR050W	NAM2	P11325	894 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	ACH1	P32316	526 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	FRM2	P37261	193 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	MOH1	P38191	138 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	SSH1	P38353	490 aa	Known RBP	4.86	□□□□□ -1.63
TRK2	YKR050W	FLO9	P39712	1322 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	ADO1	P47143	340 aa	Known RBP	4.86	□□□□□ -1.63
TRK2	YKR050W	HSV2	P50079	448 aa	Predicted RBP	4.86	□□□□□ -1.63
TRK2	YKR050W	MATALPHA1	P0CY06	175 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	HMLALPHA1	P0CY07	175 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	PET54	P10834	293 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	RNP1	P32385	249 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	NAT2	P37293	288 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	VHT1	P53241	593 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	AAH1	P53909	347 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	NRK1	P53915	240 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	CTF19	Q02732	369 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	PHO92	Q06390	306 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
TRK2	YKR050W	INP53	Q12271	1107 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	ORT1	Q12375	292 aa		4.86	□□□□□ -1.63
TRK2	YKR050W	RPL7A	P05737	244 aa	Known RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	CDC34	P14682	295 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	SNC2	P33328	115 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	ECM31	P38122	312 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	CAT5	P41735	233 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	LSM1	P47017	172 aa	Known RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	LOH1	P47055	219 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	AIM25	P47140	327 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	MRPL13	Q02204	264 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	RPL7B	Q12213	244 aa	Known RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	TOR1	P35169	2470 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	SPS2	P08459	502 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	PRB1	P09232	635 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
TRK2	YKR050W	MKS1	P34072	584 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	CLG1	P35190	452 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	YHR122W	P38829	231 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	SEN34	P39707	275 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	PUG1	P40100	303 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	SYS1	P41544	203 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	ERJ5	P43613	295 aa	Predicted RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	UBX6	P47049	396 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	LSM8	P47093	109 aa	Known RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	DIE2	P50076	525 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	YIP4	P53093	235 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	POP6	P53218	158 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	SCW4	P53334	386 aa	Known RBP	4.85	□□□□□ -1.63
TRK2	YKR050W	MRP51	Q02950	344 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	YPD1	Q07688	167 aa		4.85	□□□□□ -1.63
TRK2	YKR050W	RPS16A	P0CX51	143 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	RPS16B	P0CX52	143 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	HXT2	P23585	541 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	SED4	P25365	1065 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	AIM3	P38266	947 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	MGE1	P38523	228 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	YJL016W	P47072	561 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	RSM23	Q01163	450 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	COQ11	Q05892	277 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	KEI1	Q06346	221 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	YPL272C	Q08984	517 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	YDL180W	Q12301	547 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	CDC36	P06100	191 aa	Predicted RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	SGA1	P08019	549 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	MRPL39	P36533	70 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	ALG14	P38242	237 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	YBR096W	P38256	230 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	YEL057C	P39983	233 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	RPL6A	Q02326	176 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	YMR265C	Q03508	461 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	YDR387C	Q04162	555 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	HRI1	Q05905	244 aa	Known RBP	4.84	□□□□□ -1.63
TRK2	YKR050W	YPR196W	Q06595	470 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	HEM25	Q07534	307 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	TGS1	Q12052	315 aa		4.84	□□□□□ -1.63
TRK2	YKR050W	GCN1	P33892	2672 aa	Known RBP	4.84	□□□□□ -1.64
TRK2	YKR050W	MES1	P00958	751 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms