RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C PRO1P32264 428 aa1.91□□□□□ -2.1
UFD4YKL010C SLC1P33333 303 aa1.91□□□□□ -2.1
UFD4YKL010C YKL097CP34245 136 aa1.91□□□□□ -2.1
UFD4YKL010C MNL1P38888 796 aa1.91□□□□□ -2.1
UFD4YKL010C FMP52P40008 231 aa1.91□□□□□ -2.1
UFD4YKL010C RPL13BP40212 199 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C GPI14P47088 403 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C SAM37P50110 327 aa1.91□□□□□ -2.1
UFD4YKL010C VBA4Q04602 768 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C AIM6Q07716 390 aa1.91□□□□□ -2.1
UFD4YKL010C FEX1Q08913 375 aa1.91□□□□□ -2.1
UFD4YKL010C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
UFD4YKL010C RPL13AQ12690 199 aaPredicted RBP1.91□□□□□ -2.1
UFD4YKL010C YBR298C-AQ8TGK4 73 aa1.91□□□□□ -2.1
UFD4YKL010C IDH2P28241 369 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C PRE4P30657 266 aa1.91□□□□□ -2.1
UFD4YKL010C EMP70P32802 667 aa1.91□□□□□ -2.1
UFD4YKL010C PHO90P39535 881 aa1.91□□□□□ -2.1
UFD4YKL010C GCV3P39726 170 aaPredicted RBP1.91□□□□□ -2.1
UFD4YKL010C DLS1P40366 167 aa1.91□□□□□ -2.1
UFD4YKL010C PAU15P40585 124 aa1.91□□□□□ -2.1
UFD4YKL010C IDP2P41939 412 aa1.91□□□□□ -2.1
UFD4YKL010C ERG26P53199 349 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C YGR266WP53326 701 aa1.91□□□□□ -2.1
UFD4YKL010C SAM50P53969 484 aa1.91□□□□□ -2.1
UFD4YKL010C TIM44Q01852 431 aa1.91□□□□□ -2.1
UFD4YKL010C VBA1Q04301 562 aa1.91□□□□□ -2.1
UFD4YKL010C PAL1Q05518 499 aaKnown RBP1.91□□□□□ -2.1
UFD4YKL010C ENB1Q08299 606 aa1.91□□□□□ -2.1
UFD4YKL010C RDR1Q08904 546 aa1.91□□□□□ -2.1
UFD4YKL010C ISA2Q12425 185 aa1.91□□□□□ -2.1
UFD4YKL010C RAD52P06778 471 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C PHO2P07269 559 aa1.9□□□□□ -2.1
UFD4YKL010C PTP1P25044 335 aa1.9□□□□□ -2.1
UFD4YKL010C VMA8P32610 256 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C RML2P32611 393 aa1.9□□□□□ -2.1
UFD4YKL010C YKL077WP36081 392 aa1.9□□□□□ -2.1
UFD4YKL010C ERV15P38312 142 aa1.9□□□□□ -2.1
UFD4YKL010C RPS20P38701 121 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C ELO1P39540 310 aa1.9□□□□□ -2.1
UFD4YKL010C COX15P40086 486 aa1.9□□□□□ -2.1
UFD4YKL010C CCS1P40202 249 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C PHS1P40857 217 aa1.9□□□□□ -2.1
UFD4YKL010C NPY1P53164 384 aa1.9□□□□□ -2.1
UFD4YKL010C FMP41P53889 259 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C NGL2Q03264 515 aaKnown RBP1.9□□□□□ -2.1
UFD4YKL010C API2Q04413 109 aa1.9□□□□□ -2.1
UFD4YKL010C COQ11Q05892 277 aa1.9□□□□□ -2.1
UFD4YKL010C DCS1Q06151 350 aa1.9□□□□□ -2.1
UFD4YKL010C YRM1Q12340 786 aa1.9□□□□□ -2.1
UFD4YKL010C RRI1Q12468 440 aa1.9□□□□□ -2.1
UFD4YKL010C RPL20AP0CX23 172 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C RPL20BP0CX24 172 aaPredicted RBP1.9□□□□□ -2.11
UFD4YKL010C ARO4P32449 370 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C LYP1P32487 611 aa1.9□□□□□ -2.11
UFD4YKL010C PEX7P39108 375 aa1.9□□□□□ -2.11
UFD4YKL010C SEH1P53011 349 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C MPA43P53583 542 aaPredicted RBP1.9□□□□□ -2.11
UFD4YKL010C YNR062CP53748 327 aa1.9□□□□□ -2.11
UFD4YKL010C CAF40P53829 373 aa1.9□□□□□ -2.11
UFD4YKL010C NRK1P53915 240 aa1.9□□□□□ -2.11
UFD4YKL010C YMR315WQ04869 349 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C STP3Q05937 343 aa1.9□□□□□ -2.11
UFD4YKL010C YOR032W-AQ8TGS1 66 aa1.9□□□□□ -2.11
UFD4YKL010C QCR2P07257 368 aa1.9□□□□□ -2.11
UFD4YKL010C RPS18AP0CX55 146 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C RPS18BP0CX56 146 aaPredicted RBP1.9□□□□□ -2.11
UFD4YKL010C RED1P14291 827 aa1.9□□□□□ -2.11
UFD4YKL010C CDC34P14682 295 aa1.9□□□□□ -2.11
UFD4YKL010C MAK32P23060 363 aa1.9□□□□□ -2.11
UFD4YKL010C MDH3P32419 343 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
UFD4YKL010C SUA5P32579 426 aa1.9□□□□□ -2.11
UFD4YKL010C APD1P38281 316 aa1.9□□□□□ -2.11
UFD4YKL010C YHR122WP38829 231 aa1.9□□□□□ -2.11
UFD4YKL010C SLZ1P40167 298 aa1.9□□□□□ -2.11
UFD4YKL010C TOK1P40310 691 aa1.9□□□□□ -2.11
UFD4YKL010C GPP1P41277 250 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C PAM16P42949 149 aa1.9□□□□□ -2.11
UFD4YKL010C ALK1P43633 760 aaKnown RBP1.9□□□□□ -2.11
UFD4YKL010C YLR460CP54007 376 aa1.9□□□□□ -2.11
UFD4YKL010C SNZ1Q03148 297 aa1.9□□□□□ -2.11
UFD4YKL010C BNA7Q04066 261 aa1.9□□□□□ -2.11
UFD4YKL010C YPL191CQ08930 360 aa1.9□□□□□ -2.11
UFD4YKL010C TMS1Q12116 473 aa1.9□□□□□ -2.11
UFD4YKL010C SNU23Q12368 194 aaPredicted RBP1.9□□□□□ -2.11
UFD4YKL010C TDH2P00358 332 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C NAM9P27929 486 aa1.89□□□□□ -2.11
UFD4YKL010C ERG9P29704 444 aa1.89□□□□□ -2.11
UFD4YKL010C REC114P32841 428 aa1.89□□□□□ -2.11
UFD4YKL010C PPZ2P33329 710 aa1.89□□□□□ -2.11
UFD4YKL010C RPS27AP35997 82 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C SLM6P38343 150 aa1.89□□□□□ -2.11
UFD4YKL010C RPS27BP38711 82 aa1.89□□□□□ -2.11
UFD4YKL010C IBA57P47158 497 aa1.89□□□□□ -2.11
UFD4YKL010C SOL1P50278 321 aa1.89□□□□□ -2.11
UFD4YKL010C NSA1P53136 463 aaPredicted RBP1.89□□□□□ -2.11
UFD4YKL010C OKP1P53298 406 aa1.89□□□□□ -2.11
UFD4YKL010C SNO2P53823 222 aa1.89□□□□□ -2.11
UFD4YKL010C YIF1P53845 314 aaKnown RBP1.89□□□□□ -2.11
UFD4YKL010C NRG1Q03125 231 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms