RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W FET3P38993 636 aa2.04□□□□□ -2.08
CAP1YKL007W GTO1P48239 356 aa2.04□□□□□ -2.08
CAP1YKL007W RIB4P50861 169 aaPredicted RBP2.04□□□□□ -2.08
CAP1YKL007W ALG9P53868 555 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W FKS3Q04952 1785 aa2.04□□□□□ -2.08
CAP1YKL007W YPR064WQ12492 139 aa2.04□□□□□ -2.08
CAP1YKL007W RPP0P05317 312 aaKnown RBP2.03□□□□□ -2.08
CAP1YKL007W RPL31AP0C2H8 113 aaKnown RBP2.03□□□□□ -2.08
CAP1YKL007W SWD2P36104 329 aaPredicted RBP2.03□□□□□ -2.08
CAP1YKL007W YPC1P38298 316 aa2.03□□□□□ -2.08
CAP1YKL007W MNN5P46982 586 aa2.03□□□□□ -2.08
CAP1YKL007W EMC2P47133 292 aaKnown RBP2.03□□□□□ -2.08
CAP1YKL007W YNL260CP53846 198 aa2.03□□□□□ -2.08
CAP1YKL007W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
CAP1YKL007W ECM18Q04623 453 aa2.03□□□□□ -2.08
CAP1YKL007W YLL007CQ07799 665 aa2.03□□□□□ -2.08
CAP1YKL007W APC9Q12107 265 aa2.03□□□□□ -2.08
CAP1YKL007W SIA1Q12212 622 aa2.03□□□□□ -2.08
CAP1YKL007W RRP36Q12481 300 aaPredicted RBP2.03□□□□□ -2.08
CAP1YKL007W SIR4P11978 1358 aa2.02□□□□□ -2.09
CAP1YKL007W HIS3P06633 220 aa2.02□□□□□ -2.09
CAP1YKL007W SSA3P09435 649 aaKnown RBP2.02□□□□□ -2.09
CAP1YKL007W AEP1P32493 518 aa2.02□□□□□ -2.09
CAP1YKL007W YBL081WP38180 368 aaKnown RBP2.02□□□□□ -2.09
CAP1YKL007W YBR062CP38239 180 aa2.02□□□□□ -2.09
CAP1YKL007W KEL2P50090 882 aa2.02□□□□□ -2.09
CAP1YKL007W YPT32P51996 222 aaKnown RBP2.02□□□□□ -2.09
CAP1YKL007W PNC1P53184 216 aaKnown RBP2.02□□□□□ -2.09
CAP1YKL007W COG7P53195 279 aa2.02□□□□□ -2.09
CAP1YKL007W YPL077CQ02831 240 aa2.02□□□□□ -2.09
CAP1YKL007W MRPL23Q12487 163 aaPredicted RBP2.02□□□□□ -2.09
CAP1YKL007W YRF1-3P0CX14 1859 aa2.02□□□□□ -2.09
CAP1YKL007W YRF1-7P0CX15 1859 aa2.02□□□□□ -2.09
CAP1YKL007W YRF1-6P53819 1859 aa2.02□□□□□ -2.09
CAP1YKL007W RPL24AP04449 155 aaKnown RBP2.01□□□□□ -2.09
CAP1YKL007W RAD7P06779 565 aa2.01□□□□□ -2.09
CAP1YKL007W YKL063CP35725 167 aa2.01□□□□□ -2.09
CAP1YKL007W YKL070WP36087 169 aa2.01□□□□□ -2.09
CAP1YKL007W SPL2P38839 148 aa2.01□□□□□ -2.09
CAP1YKL007W SPT8P38915 602 aa2.01□□□□□ -2.09
CAP1YKL007W RTR1P40084 226 aaPredicted RBP2.01□□□□□ -2.09
CAP1YKL007W GCD14P46959 383 aaPredicted RBP2.01□□□□□ -2.09
CAP1YKL007W YJR141WP47172 347 aaPredicted RBP2.01□□□□□ -2.09
CAP1YKL007W MND1P53102 219 aa2.01□□□□□ -2.09
CAP1YKL007W BIO4P53630 237 aa2.01□□□□□ -2.09
CAP1YKL007W MRS2Q01926 470 aa2.01□□□□□ -2.09
CAP1YKL007W RPO41P13433 1351 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W RPS24AP0CX31 135 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W RPS24BP0CX32 135 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W MEK1P24719 497 aaPredicted RBP2□□□□□ -2.09
CAP1YKL007W ICL1P28240 557 aaPredicted RBP2□□□□□ -2.09
CAP1YKL007W CLB6P32943 380 aa2□□□□□ -2.09
CAP1YKL007W TDA11P38854 504 aa2□□□□□ -2.09
CAP1YKL007W SUR2P38992 349 aa2□□□□□ -2.09
CAP1YKL007W YER188WP40103 239 aa2□□□□□ -2.09
CAP1YKL007W GDS1P41913 522 aa2□□□□□ -2.09
CAP1YKL007W MRX5P47007 382 aa2□□□□□ -2.09
CAP1YKL007W SWT21P53873 357 aaPredicted RBP2□□□□□ -2.09
CAP1YKL007W BER1Q06688 274 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W YOR283WQ12040 230 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W TY3A-GQ12173 290 aa2□□□□□ -2.09
CAP1YKL007W TY3A-IQ99219 290 aa2□□□□□ -2.09
CAP1YKL007W UTP10P42945 1769 aaKnown RBP2□□□□□ -2.09
CAP1YKL007W YCR025CP25352 136 aa1.99□□□□□ -2.09
CAP1YKL007W CSM1P25651 190 aa1.99□□□□□ -2.09
CAP1YKL007W YUH1P35127 236 aa1.99□□□□□ -2.09
CAP1YKL007W HIS2P38635 335 aa1.99□□□□□ -2.09
CAP1YKL007W YHI9P38765 294 aa1.99□□□□□ -2.09
CAP1YKL007W MED6P38782 295 aa1.99□□□□□ -2.09
CAP1YKL007W RPE1P46969 238 aa1.99□□□□□ -2.09
CAP1YKL007W YNL050CP53952 270 aa1.99□□□□□ -2.09
CAP1YKL007W RRN5Q02983 363 aa1.99□□□□□ -2.09
CAP1YKL007W YMR209CQ03648 457 aa1.99□□□□□ -2.09
CAP1YKL007W YML018CQ03730 393 aa1.99□□□□□ -2.09
CAP1YKL007W ATC1Q04005 294 aa1.99□□□□□ -2.09
CAP1YKL007W KAP95Q06142 861 aaKnown RBP1.99□□□□□ -2.09
CAP1YKL007W GPN3Q06543 272 aa1.99□□□□□ -2.09
CAP1YKL007W YPL150WQ12152 901 aa1.99□□□□□ -2.09
CAP1YKL007W ATG5Q12380 294 aa1.99□□□□□ -2.09
CAP1YKL007W FMP16Q12497 93 aa1.99□□□□□ -2.09
CAP1YKL007W ATP6P00854 259 aa1.98□□□□□ -2.09
CAP1YKL007W GPI12P23797 304 aa1.98□□□□□ -2.09
CAP1YKL007W KRE6P32486 720 aa1.98□□□□□ -2.09
CAP1YKL007W SUA5P32579 426 aa1.98□□□□□ -2.09
CAP1YKL007W RPC37P36121 282 aa1.98□□□□□ -2.09
CAP1YKL007W MRPL37P36532 105 aa1.98□□□□□ -2.09
CAP1YKL007W PHO89P38361 574 aa1.98□□□□□ -2.09
CAP1YKL007W RCY1P39531 840 aa1.98□□□□□ -2.09
CAP1YKL007W AGP3P43548 558 aa1.98□□□□□ -2.09
CAP1YKL007W OST3P48439 350 aa1.98□□□□□ -2.09
CAP1YKL007W MPP6P53725 186 aaPredicted RBP1.98□□□□□ -2.09
CAP1YKL007W DPP1Q05521 289 aa1.98□□□□□ -2.09
CAP1YKL007W TAZ1Q06510 381 aa1.98□□□□□ -2.09
CAP1YKL007W ASR1Q06834 288 aa1.98□□□□□ -2.09
CAP1YKL007W ISD11Q6Q560 94 aa1.98□□□□□ -2.09
CAP1YKL007W RIM15P43565 1770 aa1.98□□□□□ -2.09
CAP1YKL007W YEL009C-AA0A023PZF2 135 aa1.97□□□□□ -2.09
CAP1YKL007W TFS1P14306 219 aa1.97□□□□□ -2.09
CAP1YKL007W SEN34P39707 275 aa1.97□□□□□ -2.09
CAP1YKL007W SHQ1P40486 507 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms