RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	RIB7	P33312	244 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	PIR5	P46999	287 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	SSU72	P53538	206 aa	Predicted RBP	1.48	□□□□□ -2.17
NUP82	YJL061W	OST6	Q03723	332 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	COX2	P00410	251 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	RAD3	P06839	778 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	COS2	P0CX12	379 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	COS3	P0CX13	379 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	TOM40	P23644	387 aa	Known RBP	1.48	□□□□□ -2.17
NUP82	YJL061W	DRE2	P36152	348 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	YHL049C	P38722	271 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	YJL028W	P47062	111 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	MAL13	P53338	473 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	AAH1	P53909	347 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	ALG11	P53954	548 aa	Known RBP	1.48	□□□□□ -2.17
NUP82	YJL061W	RGM1	Q00453	211 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	ADH6	Q04894	360 aa	Known RBP	1.48	□□□□□ -2.17
NUP82	YJL061W	COX20	Q04935	205 aa		1.48	□□□□□ -2.17
NUP82	YJL061W	RAD10	P06838	210 aa		1.47	□□□□□ -2.17
NUP82	YJL061W	YHR045W	P38775	560 aa		1.47	□□□□□ -2.17
NUP82	YJL061W	MYO5	Q04439	1219 aa	Known RBP	1.47	□□□□□ -2.17
NUP82	YJL061W	SPO77	Q06134	477 aa		1.47	□□□□□ -2.17
NUP82	YJL061W	PST1	Q12355	444 aa		1.47	□□□□□ -2.17
NUP82	YJL061W	YPL247C	Q12523	523 aa		1.47	□□□□□ -2.17
NUP82	YJL061W	RPL26A	P05743	127 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	DAL82	P21705	255 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	RNP1	P32385	249 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	CLB6	P32943	380 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	MAL32	P38158	584 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	MED6	P38782	295 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	MEP1	P40260	492 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	DSN1	P40568	576 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	RPL10	P41805	221 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	YAR1	P46683	200 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	YJL118W	P47022	219 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	RPL26B	P53221	127 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	MAL12	P53341	584 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	GRH1	Q04410	372 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	BOP2	Q06150	570 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	CTS2	Q06350	511 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	SLD7	Q08457	257 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	YOR268C	Q08734	132 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	TY3A-G	Q12173	290 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	NOT5	Q12514	560 aa	Predicted RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	TY3A-I	Q99219	290 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	DPM1	P14020	267 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	VPS3	P23643	1011 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	CWP1	P28319	239 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	PRS2	P38620	318 aa	Known RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	DSK2	P48510	373 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	RRP36	Q12481	300 aa	Predicted RBP	1.46	□□□□□ -2.18
NUP82	YJL061W	SNF8	Q12483	233 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	YPL119C-A	Q3E751	87 aa		1.46	□□□□□ -2.18
NUP82	YJL061W	POX1	P13711	748 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	SNF6	P18888	332 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	PPH21	P23594	369 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	GDH2	P33327	1092 aa	Known RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	EBS1	Q03466	884 aa	Known RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	YMR114C	Q04471	368 aa	Known RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	KAP95	Q06142	861 aa	Known RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	RDS3	Q06835	107 aa	Predicted RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	BTS1	Q12051	335 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	POL30	P15873	258 aa	Known RBP	1.45	□□□□□ -2.18
NUP82	YJL061W	ECM13	P38195	257 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	COG3	P40094	801 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	MNN5	P46982	586 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	GON7	P46984	123 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	YJL016W	P47072	561 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	YDR209C	Q03480	137 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	ATG17	Q06410	417 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	SUE1	Q06524	206 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	PLB3	Q08108	686 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	GEP5	Q12393	293 aa		1.45	□□□□□ -2.18
NUP82	YJL061W	QRI5	P32344	111 aa		1.44	□□□□□ -2.18
NUP82	YJL061W	TIF34	P40217	347 aa	Known RBP	1.44	□□□□□ -2.18
NUP82	YJL061W	NBP1	P52919	319 aa	Predicted RBP	1.44	□□□□□ -2.18
NUP82	YJL061W	MDM34	P53083	459 aa		1.44	□□□□□ -2.18
NUP82	YJL061W	EMI1	Q04406	187 aa		1.44	□□□□□ -2.18
NUP82	YJL061W	VPS68	Q12016	184 aa		1.44	□□□□□ -2.18
NUP82	YJL061W	YBL008W-A	Q3E821	79 aa		1.44	□□□□□ -2.18
NUP82	YJL061W	SSH1	P38353	490 aa	Known RBP	1.43	□□□□□ -2.18
NUP82	YJL061W	ASI3	P53983	676 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	YPR147C	Q06522	304 aa	Known RBP	1.43	□□□□□ -2.18
NUP82	YJL061W	MSF1	P08425	469 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	RSR1	P13856	272 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	MRX3	P38172	270 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	YHL026C	P38740	315 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	YJR146W	P47174	117 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	YDR124W	Q04608	324 aa		1.43	□□□□□ -2.18
NUP82	YJL061W	YOR283W	Q12040	230 aa	Known RBP	1.43	□□□□□ -2.18
NUP82	YJL061W	RNA15	P25299	296 aa	Predicted RBP	1.42	□□□□□ -2.18
NUP82	YJL061W	YUH1	P35127	236 aa		1.42	□□□□□ -2.18
NUP82	YJL061W	JEN1	P36035	616 aa		1.42	□□□□□ -2.18
NUP82	YJL061W	PRS4	P38063	326 aa	Predicted RBP	1.42	□□□□□ -2.18
NUP82	YJL061W	MRPL49	P40858	161 aa	Predicted RBP	1.42	□□□□□ -2.18
NUP82	YJL061W	GOT1	Q03554	138 aa		1.42	□□□□□ -2.18
NUP82	YJL061W	PEX12	Q04370	399 aa		1.42	□□□□□ -2.18
NUP82	YJL061W	SDO1	Q07953	250 aa	Known RBP	1.42	□□□□□ -2.18
NUP82	YJL061W	YOL107W	Q12239	342 aa		1.42	□□□□□ -2.18
NUP82	YJL061W	YPR011C	Q12251	326 aa		1.42	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms