RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MRPL37P36532 105 aa3.87□□□□□ -1.79
PRE9YGR135W SHE1P38200 338 aa3.87□□□□□ -1.79
PRE9YGR135W HTD2P38790 280 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W BFR1P38934 470 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79 RIP-Chip
PRE9YGR135W RCY1P39531 840 aa3.87□□□□□ -1.79
PRE9YGR135W RFC4P40339 323 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W SWM2P40342 146 aa3.87□□□□□ -1.79
PRE9YGR135W FMC1P40491 155 aa3.87□□□□□ -1.79
PRE9YGR135W PSA1P41940 361 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W RPE1P46969 238 aa3.87□□□□□ -1.79
PRE9YGR135W TAD2P47058 250 aa3.87□□□□□ -1.79
PRE9YGR135W COS10P52924 374 aa3.87□□□□□ -1.79
PRE9YGR135W TRM112P53738 135 aaPredicted RBP3.87□□□□□ -1.79
PRE9YGR135W TPS1Q00764 495 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W YPL113CQ02961 396 aa3.87□□□□□ -1.79
PRE9YGR135W ODC1Q03028 310 aa3.87□□□□□ -1.79
PRE9YGR135W RVB1Q03940 463 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W VBA1Q04301 562 aa3.87□□□□□ -1.79
PRE9YGR135W YMR310CQ04867 317 aaPredicted RBP3.87□□□□□ -1.79
PRE9YGR135W NNT1Q05874 261 aa3.87□□□□□ -1.79
PRE9YGR135W YOR365CQ08844 703 aa3.87□□□□□ -1.79
PRE9YGR135W YPL245WQ12179 454 aaKnown RBP3.87□□□□□ -1.79
PRE9YGR135W TIR4Q12218 487 aaPredicted RBP3.87□□□□□ -1.79
PRE9YGR135W MED4Q12343 284 aa3.87□□□□□ -1.79
PRE9YGR135W PST1Q12355 444 aa3.87□□□□□ -1.79
PRE9YGR135W VMA9Q3E7B6 73 aa3.87□□□□□ -1.79
PRE9YGR135W YAR066WP0CX18 203 aa3.86□□□□□ -1.79
PRE9YGR135W YHR214WP0CX19 203 aa3.86□□□□□ -1.79
PRE9YGR135W POX1P13711 748 aa3.86□□□□□ -1.79
PRE9YGR135W RPI1P23250 407 aaKnown RBP3.86□□□□□ -1.79
PRE9YGR135W AHC2P25649 128 aa3.86□□□□□ -1.79
PRE9YGR135W LDS1P31379 325 aa3.86□□□□□ -1.79
PRE9YGR135W VAM7P32912 316 aa3.86□□□□□ -1.79
PRE9YGR135W SPO23P33757 523 aa3.86□□□□□ -1.79
PRE9YGR135W SHE2P36068 246 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
PRE9YGR135W FLO10P36170 1169 aa3.86□□□□□ -1.79
PRE9YGR135W QDR3P38227 689 aa3.86□□□□□ -1.79
PRE9YGR135W YHR122WP38829 231 aa3.86□□□□□ -1.79
PRE9YGR135W ALP1P38971 573 aa3.86□□□□□ -1.79
PRE9YGR135W GAT2P40209 560 aa3.86□□□□□ -1.79
PRE9YGR135W SAS2P40963 338 aa3.86□□□□□ -1.79
PRE9YGR135W PAM16P42949 149 aa3.86□□□□□ -1.79
PRE9YGR135W YJR011CP47086 261 aaPredicted RBP3.86□□□□□ -1.79
PRE9YGR135W SNN1P48232 102 aa3.86□□□□□ -1.79
PRE9YGR135W UBP8P50102 471 aa3.86□□□□□ -1.79
PRE9YGR135W VOA1P53262 265 aa3.86□□□□□ -1.79
PRE9YGR135W MPP6P53725 186 aaPredicted RBP3.86□□□□□ -1.79
PRE9YGR135W GOR1P53839 350 aa3.86□□□□□ -1.79
PRE9YGR135W YNL134CP53912 376 aaKnown RBP3.86□□□□□ -1.79
PRE9YGR135W PIR3Q03180 325 aa3.86□□□□□ -1.79
PRE9YGR135W RIM13Q03792 727 aa3.86□□□□□ -1.79
PRE9YGR135W ELP6Q04868 273 aa3.86□□□□□ -1.79
PRE9YGR135W RNH202Q05635 350 aa3.86□□□□□ -1.79
PRE9YGR135W ATG38Q05789 226 aaKnown RBP3.86□□□□□ -1.79
PRE9YGR135W DCR2Q05924 578 aa3.86□□□□□ -1.79
PRE9YGR135W SSK1Q07084 712 aa3.86□□□□□ -1.79
PRE9YGR135W YPR063CQ12160 140 aa3.86□□□□□ -1.79
PRE9YGR135W PKH2Q12236 1081 aaKnown RBP3.86□□□□□ -1.79
PRE9YGR135W RGT2Q12300 763 aa3.86□□□□□ -1.79
PRE9YGR135W RKM5Q12367 367 aa3.86□□□□□ -1.79
PRE9YGR135W RRP12Q12754 1228 aaKnown RBP3.86□□□□□ -1.79
PRE9YGR135W YLR099W-AQ3E798 87 aa3.86□□□□□ -1.79
PRE9YGR135W PCC1Q3E833 88 aa3.86□□□□□ -1.79
PRE9YGR135W CAR2P07991 424 aaKnown RBP3.85□□□□□ -1.79
PRE9YGR135W YFR010W-AP0C5N0 62 aa3.85□□□□□ -1.79
PRE9YGR135W CDC23P16522 626 aa3.85□□□□□ -1.79
PRE9YGR135W MAK32P23060 363 aa3.85□□□□□ -1.79
PRE9YGR135W YMC1P32331 307 aa3.85□□□□□ -1.79
PRE9YGR135W DRE2P36152 348 aa3.85□□□□□ -1.79
PRE9YGR135W SOL2P37262 315 aa3.85□□□□□ -1.79
PRE9YGR135W RTC2P38279 296 aa3.85□□□□□ -1.79
PRE9YGR135W INM1P38710 295 aa3.85□□□□□ -1.79
PRE9YGR135W YHR177WP38867 453 aa3.85□□□□□ -1.79
PRE9YGR135W IKI1P38874 309 aa3.85□□□□□ -1.79
PRE9YGR135W PTH1P38876 190 aaKnown RBP3.85□□□□□ -1.79
PRE9YGR135W SEN34P39707 275 aa3.85□□□□□ -1.79
PRE9YGR135W UTP25P40498 721 aaKnown RBP3.85□□□□□ -1.79
PRE9YGR135W RPL10P41805 221 aaKnown RBP3.85□□□□□ -1.79
PRE9YGR135W AIM25P47140 327 aa3.85□□□□□ -1.79
PRE9YGR135W PMT5P52867 743 aa3.85□□□□□ -1.79
PRE9YGR135W YGL159WP53110 370 aa3.85□□□□□ -1.79
PRE9YGR135W SAY1P53324 424 aa3.85□□□□□ -1.79
PRE9YGR135W YNL140CP53910 189 aa3.85□□□□□ -1.79
PRE9YGR135W YPL014WQ02606 381 aa3.85□□□□□ -1.79
PRE9YGR135W ARL3Q02804 198 aa3.85□□□□□ -1.79
PRE9YGR135W OST6Q03723 332 aa3.85□□□□□ -1.79
PRE9YGR135W YDR387CQ04162 555 aa3.85□□□□□ -1.79
PRE9YGR135W GAS2Q06135 555 aa3.85□□□□□ -1.79
PRE9YGR135W ANT1Q06497 328 aa3.85□□□□□ -1.79
PRE9YGR135W YPR091CQ06833 770 aa3.85□□□□□ -1.79
PRE9YGR135W YDL218WQ07629 317 aa3.85□□□□□ -1.79
PRE9YGR135W RRP42Q12277 265 aaPredicted RBP3.85□□□□□ -1.79
PRE9YGR135W EAF3Q12432 401 aa3.85□□□□□ -1.79
PRE9YGR135W QCR7P00128 127 aa3.84□□□□□ -1.79
PRE9YGR135W PUT1P09368 476 aa3.84□□□□□ -1.79
PRE9YGR135W SNF6P18888 332 aa3.84□□□□□ -1.79
PRE9YGR135W MRPL8P22353 238 aa3.84□□□□□ -1.79
PRE9YGR135W EXG1P23776 448 aaKnown RBP3.84□□□□□ -1.79
PRE9YGR135W NAM9P27929 486 aa3.84□□□□□ -1.79
PRE9YGR135W SUA5P32579 426 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms