RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C PPA2P28239 310 aa5.8□□□□□ -1.48
YPT1YFL038C EHD3P28817 500 aa5.8□□□□□ -1.48
YPT1YFL038C HSP150P32478 413 aa5.8□□□□□ -1.48
YPT1YFL038C MKK2P32491 506 aa5.8□□□□□ -1.48
YPT1YFL038C FMT1P32785 401 aa5.8□□□□□ -1.48
YPT1YFL038C EMP70P32802 667 aa5.8□□□□□ -1.48
YPT1YFL038C GCV3P39726 170 aaPredicted RBP5.8□□□□□ -1.48
YPT1YFL038C CFD1P40558 293 aa5.8□□□□□ -1.48
YPT1YFL038C LCL3P53153 274 aa5.8□□□□□ -1.48
YPT1YFL038C CUZ1P53899 274 aa5.8□□□□□ -1.48
YPT1YFL038C TPP1Q03796 238 aa5.8□□□□□ -1.48
YPT1YFL038C HNT1Q04344 158 aaKnown RBP5.8□□□□□ -1.48
YPT1YFL038C AGE1Q04412 482 aa5.8□□□□□ -1.48
YPT1YFL038C NNT1Q05874 261 aa5.8□□□□□ -1.48
YPT1YFL038C YPR147CQ06522 304 aaKnown RBP5.8□□□□□ -1.48
YPT1YFL038C SYM1Q06563 197 aa5.8□□□□□ -1.48
YPT1YFL038C MCH4Q08268 501 aa5.8□□□□□ -1.48
YPT1YFL038C TGS1Q12052 315 aa5.8□□□□□ -1.48
YPT1YFL038C RRI1Q12468 440 aa5.8□□□□□ -1.48
YPT1YFL038C PET20Q99373 253 aa5.8□□□□□ -1.48
YPT1YFL038C SCEIP03882 235 aa5.79□□□□□ -1.48
YPT1YFL038C MSW1P04803 379 aa5.79□□□□□ -1.48
YPT1YFL038C SCO1P23833 295 aa5.79□□□□□ -1.48
YPT1YFL038C YCR006CP25350 157 aa5.79□□□□□ -1.48
YPT1YFL038C ADH7P25377 361 aa5.79□□□□□ -1.48
YPT1YFL038C PMT2P31382 759 aa5.79□□□□□ -1.48
YPT1YFL038C PPZ2P33329 710 aa5.79□□□□□ -1.48
YPT1YFL038C PAN3P36102 679 aaPredicted RBP5.79□□□□□ -1.48
YPT1YFL038C FRM2P37261 193 aa5.79□□□□□ -1.48
YPT1YFL038C UMP1P38293 148 aa5.79□□□□□ -1.48
YPT1YFL038C BFR1P38934 470 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
YPT1YFL038C ASP1P38986 381 aaPredicted RBP5.79□□□□□ -1.48
YPT1YFL038C SSO2P39926 295 aa5.79□□□□□ -1.48
YPT1YFL038C LTP1P40347 161 aa5.79□□□□□ -1.48
YPT1YFL038C YPS6P40583 537 aa5.79□□□□□ -1.48
YPT1YFL038C IDP2P41939 412 aa5.79□□□□□ -1.48
YPT1YFL038C ERJ5P43613 295 aaPredicted RBP5.79□□□□□ -1.48
YPT1YFL038C SRB7P47822 140 aa5.79□□□□□ -1.48
YPT1YFL038C NIT3P49954 291 aa5.79□□□□□ -1.48
YPT1YFL038C TRM9P49957 279 aa5.79□□□□□ -1.48
YPT1YFL038C NIF3P53081 288 aa5.79□□□□□ -1.48
YPT1YFL038C SAM50P53969 484 aa5.79□□□□□ -1.48
YPT1YFL038C PET191Q02772 108 aa5.79□□□□□ -1.48
YPT1YFL038C RVB1Q03940 463 aaKnown RBP5.79□□□□□ -1.48
YPT1YFL038C SPR28Q04921 423 aa5.79□□□□□ -1.48
YPT1YFL038C SEI1Q06058 285 aa5.79□□□□□ -1.48
YPT1YFL038C NOC4Q06512 552 aaPredicted RBP5.79□□□□□ -1.48
YPT1YFL038C SRL2Q12020 392 aa5.79□□□□□ -1.48
YPT1YFL038C YRA1Q12159 226 aaKnown RBP5.79□□□□□ -1.48
YPT1YFL038C MCT1Q12283 360 aa5.79□□□□□ -1.48
YPT1YFL038C TFC7Q12415 435 aa5.79□□□□□ -1.48
YPT1YFL038C EAF3Q12432 401 aa5.79□□□□□ -1.48
YPT1YFL038C TFB5Q3E7C1 72 aaPredicted RBP5.79□□□□□ -1.48
YPT1YFL038C TDH1P00360 332 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C LDS1P31379 325 aa5.78□□□□□ -1.48
YPT1YFL038C ARO4P32449 370 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C ECM25P32525 599 aa5.78□□□□□ -1.48
YPT1YFL038C SRB6P32570 121 aa5.78□□□□□ -1.48
YPT1YFL038C YKR073CP36153 106 aa5.78□□□□□ -1.48
YPT1YFL038C APD1P38281 316 aa5.78□□□□□ -1.48
YPT1YFL038C LSM12P38828 187 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C SOL3P38858 249 aa5.78□□□□□ -1.48
YPT1YFL038C SLZ1P40167 298 aa5.78□□□□□ -1.48
YPT1YFL038C SPG5P42933 373 aa5.78□□□□□ -1.48
YPT1YFL038C YJR111CP47148 283 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C YJR115WP47152 169 aa5.78□□□□□ -1.48
YPT1YFL038C ECL1P48235 211 aa5.78□□□□□ -1.48
YPT1YFL038C PHO23P50947 330 aa5.78□□□□□ -1.48
YPT1YFL038C ACS2P52910 683 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C OKP1P53298 406 aa5.78□□□□□ -1.48
YPT1YFL038C ODC1Q03028 310 aa5.78□□□□□ -1.48
YPT1YFL038C VBA4Q04602 768 aaKnown RBP5.78□□□□□ -1.48
YPT1YFL038C YPL272CQ08984 517 aa5.78□□□□□ -1.48
YPT1YFL038C YRM1Q12340 786 aa5.78□□□□□ -1.48
YPT1YFL038C SGA1P08019 549 aa5.77□□□□□ -1.49
YPT1YFL038C MRP2P10663 115 aaPredicted RBP5.77□□□□□ -1.49
YPT1YFL038C IFM1P25038 676 aa5.77□□□□□ -1.49
YPT1YFL038C KRR1P25586 316 aaPredicted RBP5.77□□□□□ -1.49
YPT1YFL038C VMA5P31412 392 aaKnown RBP5.77□□□□□ -1.49
YPT1YFL038C RPD3P32561 433 aa5.77□□□□□ -1.49
YPT1YFL038C MRT4P33201 236 aaKnown RBP5.77□□□□□ -1.49
YPT1YFL038C GRE3P38715 327 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
YPT1YFL038C SNO3P43544 222 aa5.77□□□□□ -1.49
YPT1YFL038C LYS5P50113 272 aa5.77□□□□□ -1.49
YPT1YFL038C YGL159WP53110 370 aa5.77□□□□□ -1.49
YPT1YFL038C AAH1P53909 347 aa5.77□□□□□ -1.49
YPT1YFL038C YMR265CQ03508 461 aaKnown RBP5.77□□□□□ -1.49
YPT1YFL038C CAC2Q04199 468 aa5.77□□□□□ -1.49
YPT1YFL038C YML053CQ04978 212 aa5.77□□□□□ -1.49
YPT1YFL038C GRE1Q08969 168 aa5.77□□□□□ -1.49
YPT1YFL038C PRP46Q12417 451 aaPredicted RBP5.77□□□□□ -1.49
YPT1YFL038C ISN1Q99312 450 aa5.77□□□□□ -1.49
YPT1YFL038C BEM2P39960 2167 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C TPI1P00942 248 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C SSA3P09435 649 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C SNF5P18480 905 aa5.76□□□□□ -1.49
YPT1YFL038C RFA3P26755 122 aaKnown RBP5.76□□□□□ -1.49
YPT1YFL038C MCM10P32354 571 aa5.76□□□□□ -1.49
YPT1YFL038C COQ2P32378 372 aa5.76□□□□□ -1.49
YPT1YFL038C MTC7P32633 139 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms