RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B ARO7P32178 256 aa12.13□□□□□ -0.47
YER088W-BYER088W-B DOA4P32571 926 aa12.13□□□□□ -0.47
YER088W-BYER088W-B MNS1P32906 549 aa12.13□□□□□ -0.47
YER088W-BYER088W-B SHM2P37291 469 aaKnown RBP12.13□□□□□ -0.47
YER088W-BYER088W-B CIN2P46670 268 aa12.13□□□□□ -0.47
YER088W-BYER088W-B YGL204CP53089 101 aa12.13□□□□□ -0.47
YER088W-BYER088W-B MTL1P53214 551 aa12.13□□□□□ -0.47
YER088W-BYER088W-B CIK1Q01649 594 aa12.13□□□□□ -0.47
YER088W-BYER088W-B SPO24Q3E752 67 aa12.13□□□□□ -0.47
YER088W-BYER088W-B RPL30P14120 105 aaKnown RBP12.12□□□□□ -0.47
YER088W-BYER088W-B AHC2P25649 128 aa12.12□□□□□ -0.47
YER088W-BYER088W-B FAT1P38225 669 aa12.12□□□□□ -0.47
YER088W-BYER088W-B YER121WP40076 114 aa12.12□□□□□ -0.47
YER088W-BYER088W-B DDI1P40087 428 aa12.12□□□□□ -0.47
YER088W-BYER088W-B PHB2P50085 310 aa12.12□□□□□ -0.47
YER088W-BYER088W-B YIP4P53093 235 aa12.12□□□□□ -0.47
YER088W-BYER088W-B TYW3P53177 273 aa12.12□□□□□ -0.47
YER088W-BYER088W-B SLI1P53304 468 aa12.12□□□□□ -0.47
YER088W-BYER088W-B TGS1Q12052 315 aa12.12□□□□□ -0.47
YER088W-BYER088W-B USB1Q12208 290 aaKnown RBP12.12□□□□□ -0.47
YER088W-BYER088W-B FSH3Q99369 266 aa12.12□□□□□ -0.47
YER088W-BYER088W-B URA2P07259 2214 aaKnown RBP12.11□□□□□ -0.47
YER088W-BYER088W-B SSH1P38353 490 aaKnown RBP12.11□□□□□ -0.47
YER088W-BYER088W-B YJR120WP47157 116 aa12.11□□□□□ -0.47
YER088W-BYER088W-B SBH2P52871 88 aa12.11□□□□□ -0.47
YER088W-BYER088W-B SCW11P53189 542 aa12.11□□□□□ -0.47
YER088W-BYER088W-B PEF1P53238 335 aa12.11□□□□□ -0.47
YER088W-BYER088W-B ATG17Q06410 417 aa12.11□□□□□ -0.47
YER088W-BYER088W-B YOR097CQ12274 175 aaPredicted RBP12.11□□□□□ -0.47
YER088W-BYER088W-B YLR099W-AQ3E798 87 aa12.11□□□□□ -0.47
YER088W-BYER088W-B YEL009C-AA0A023PZF2 135 aa12.1□□□□□ -0.47
YER088W-BYER088W-B REC114P32841 428 aa12.1□□□□□ -0.47
YER088W-BYER088W-B MKS1P34072 584 aa12.1□□□□□ -0.47
YER088W-BYER088W-B MTH1P35198 433 aa12.1□□□□□ -0.47
YER088W-BYER088W-B ERJ5P43613 295 aaPredicted RBP12.1□□□□□ -0.47
YER088W-BYER088W-B YAE1P47118 141 aaPredicted RBP12.1□□□□□ -0.47
YER088W-BYER088W-B DLT1Q04216 342 aa12.1□□□□□ -0.47
YER088W-BYER088W-B ASR1Q06834 288 aa12.1□□□□□ -0.47
YER088W-BYER088W-B GEP5Q12393 293 aa12.1□□□□□ -0.47
YER088W-BYER088W-B HNM1P19807 563 aa12.09□□□□□ -0.47
YER088W-BYER088W-B TCM62P38228 572 aaKnown RBP12.09□□□□□ -0.47
YER088W-BYER088W-B ARC40P38328 384 aaKnown RBP12.09□□□□□ -0.47
YER088W-BYER088W-B YCK3P39962 524 aa12.09□□□□□ -0.47
YER088W-BYER088W-B PMT5P52867 743 aa12.09□□□□□ -0.47
YER088W-BYER088W-B YGL159WP53110 370 aa12.09□□□□□ -0.47
YER088W-BYER088W-B YDC1Q02896 317 aa12.09□□□□□ -0.47
YER088W-BYER088W-B SPO19Q03029 223 aa12.09□□□□□ -0.47
YER088W-BYER088W-B SIR2P06700 562 aa12.08□□□□□ -0.48
YER088W-BYER088W-B SGA1P08019 549 aa12.08□□□□□ -0.48
YER088W-BYER088W-B PAU2P32612 120 aa12.08□□□□□ -0.48
YER088W-BYER088W-B GLR1P41921 483 aaKnown RBP12.08□□□□□ -0.48
YER088W-BYER088W-B YDR179W-AQ03983 463 aa12.08□□□□□ -0.48
YER088W-BYER088W-B SSK1Q07084 712 aa12.08□□□□□ -0.48
YER088W-BYER088W-B CDC31P06704 161 aaKnown RBP12.07□□□□□ -0.48
YER088W-BYER088W-B ADK1P07170 222 aaKnown RBP12.07□□□□□ -0.48
YER088W-BYER088W-B AFG1P32317 509 aa12.07□□□□□ -0.48
YER088W-BYER088W-B YHL044WP38727 235 aa12.07□□□□□ -0.48
YER088W-BYER088W-B PCL6P40038 420 aa12.07□□□□□ -0.48
YER088W-BYER088W-B RBL2P48606 106 aaKnown RBP12.07□□□□□ -0.48
YER088W-BYER088W-B POP6P53218 158 aa12.07□□□□□ -0.48
YER088W-BYER088W-B YNL046WP53956 172 aa12.07□□□□□ -0.48
YER088W-BYER088W-B YPR098CQ06089 161 aa12.07□□□□□ -0.48
YER088W-BYER088W-B PEX30Q06169 523 aa12.07□□□□□ -0.48
YER088W-BYER088W-B HEM25Q07534 307 aa12.07□□□□□ -0.48
YER088W-BYER088W-B RFU1Q08003 200 aa12.07□□□□□ -0.48
YER088W-BYER088W-B YBL113CQ7M4S9 792 aa12.07□□□□□ -0.48
YER088W-BYER088W-B YML003WP0CF16 290 aa12.06□□□□□ -0.48
YER088W-BYER088W-B MATALPHA1P0CY06 175 aa12.06□□□□□ -0.48
YER088W-BYER088W-B HMLALPHA1P0CY07 175 aa12.06□□□□□ -0.48
YER088W-BYER088W-B PPZ2P33329 710 aa12.06□□□□□ -0.48
YER088W-BYER088W-B ZRT3P34240 503 aa12.06□□□□□ -0.48
YER088W-BYER088W-B SFK1P35735 353 aa12.06□□□□□ -0.48
YER088W-BYER088W-B RCN1P36054 211 aa12.06□□□□□ -0.48
YER088W-BYER088W-B YIR020CP40575 100 aa12.06□□□□□ -0.48
YER088W-BYER088W-B YJL218WP40892 196 aaKnown RBP12.06□□□□□ -0.48
YER088W-BYER088W-B NCA3P46955 337 aa12.06□□□□□ -0.48
YER088W-BYER088W-B IMO32P53219 342 aa12.06□□□□□ -0.48
YER088W-BYER088W-B GRX3Q03835 250 aa12.06□□□□□ -0.48
YER088W-BYER088W-B SNA4Q07549 140 aa12.06□□□□□ -0.48
YER088W-BYER088W-B YLR108CQ12259 485 aa12.06□□□□□ -0.48
YER088W-BYER088W-B RTR2Q12378 196 aa12.06□□□□□ -0.48
YER088W-BYER088W-B RPL39P04650 51 aa12.05□□□□□ -0.48
YER088W-BYER088W-B PHO4P07270 312 aaKnown RBP12.05□□□□□ -0.48
YER088W-BYER088W-B SAG1P20840 650 aa12.05□□□□□ -0.48
YER088W-BYER088W-B RPS5P26783 225 aaKnown RBP12.05□□□□□ -0.48
YER088W-BYER088W-B RNH201P53942 307 aa12.05□□□□□ -0.48
YER088W-BYER088W-B YKR005CQ02203 525 aa12.05□□□□□ -0.48
YER088W-BYER088W-B RPL24BP24000 155 aaKnown RBP12.04□□□□□ -0.48
YER088W-BYER088W-B ERG24P32462 438 aaKnown RBP12.04□□□□□ -0.48
YER088W-BYER088W-B RIO2P40160 425 aaKnown RBP12.04□□□□□ -0.48
YER088W-BYER088W-B AVT4P50944 713 aa12.04□□□□□ -0.48
YER088W-BYER088W-B DOC1P53068 250 aa12.04□□□□□ -0.48
YER088W-BYER088W-B GMC1Q04399 608 aa12.04□□□□□ -0.48
YER088W-BYER088W-B ORT1Q12375 292 aa12.04□□□□□ -0.48
YER088W-BYER088W-B YND1P40009 630 aa12.03□□□□□ -0.48
YER088W-BYER088W-B SPR28Q04921 423 aa12.03□□□□□ -0.48
YER088W-BYER088W-B TIR4Q12218 487 aaPredicted RBP12.03□□□□□ -0.48
YER088W-BYER088W-B GCN4P03069 281 aa12.02□□□□□ -0.49
YER088W-BYER088W-B SNC2P33328 115 aa12.02□□□□□ -0.49
YER088W-BYER088W-B RRP17Q04031 235 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms