RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C ERJ5P43613 295 aaPredicted RBP9.47□□□□□ -0.89
SPC25YER018C NIT3P49954 291 aa9.47□□□□□ -0.89
SPC25YER018C RPA14P50106 137 aa9.47□□□□□ -0.89
SPC25YER018C POP6P53218 158 aa9.47□□□□□ -0.89
SPC25YER018C TNA1P53322 534 aa9.47□□□□□ -0.89
SPC25YER018C TPO3Q06451 622 aa9.47□□□□□ -0.89
SPC25YER018C IZH2Q12442 317 aa9.47□□□□□ -0.89
SPC25YER018C RPL35AP0CX84 120 aaKnown RBP9.46□□□□□ -0.9
SPC25YER018C RPL35BP0CX85 120 aaKnown RBP9.46□□□□□ -0.9
SPC25YER018C MAK32P23060 363 aa9.46□□□□□ -0.9
SPC25YER018C PPG1P32838 368 aa9.46□□□□□ -0.9
SPC25YER018C SNC2P33328 115 aa9.46□□□□□ -0.9
SPC25YER018C CLG1P35190 452 aa9.46□□□□□ -0.9
SPC25YER018C HTD2P38790 280 aaKnown RBP9.46□□□□□ -0.9
SPC25YER018C MOB2P43563 287 aa9.46□□□□□ -0.9
SPC25YER018C CIN2P46670 268 aa9.46□□□□□ -0.9
SPC25YER018C CTK2P46962 323 aa9.46□□□□□ -0.9
SPC25YER018C YMR130WQ04223 302 aa9.46□□□□□ -0.9
SPC25YER018C CRR1Q05790 422 aa9.46□□□□□ -0.9
SPC25YER018C FUR4P05316 633 aaKnown RBP9.45□□□□□ -0.9
SPC25YER018C PUP1P25043 261 aa9.45□□□□□ -0.9
SPC25YER018C MRT4P33201 236 aaKnown RBP9.45□□□□□ -0.9
SPC25YER018C TAT1P38085 619 aa9.45□□□□□ -0.9
SPC25YER018C ATF1P40353 525 aa9.45□□□□□ -0.9
SPC25YER018C BNA6P43619 295 aa9.45□□□□□ -0.9
SPC25YER018C ALG12P53730 551 aa9.45□□□□□ -0.9
SPC25YER018C RPL6AQ02326 176 aaKnown RBP9.45□□□□□ -0.9
SPC25YER018C CTF19Q02732 369 aa9.45□□□□□ -0.9
SPC25YER018C FRE3Q08905 711 aa9.45□□□□□ -0.9
SPC25YER018C ISA2Q12425 185 aa9.45□□□□□ -0.9
SPC25YER018C TDH3P00359 332 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
SPC25YER018C ATG15P25641 520 aa9.44□□□□□ -0.9
SPC25YER018C DBF20P32328 564 aa9.44□□□□□ -0.9
SPC25YER018C SEC66P33754 206 aa9.44□□□□□ -0.9
SPC25YER018C UBX6P47049 396 aa9.44□□□□□ -0.9
SPC25YER018C VHT1P53241 593 aa9.44□□□□□ -0.9
SPC25YER018C SCW4P53334 386 aaKnown RBP9.44□□□□□ -0.9
SPC25YER018C RNH201P53942 307 aa9.44□□□□□ -0.9
SPC25YER018C BUD25P85052 153 aa9.44□□□□□ -0.9
SPC25YER018C YKR005CQ02203 525 aa9.44□□□□□ -0.9
SPC25YER018C YLR283WQ05867 314 aa9.44□□□□□ -0.9
SPC25YER018C INP53Q12271 1107 aa9.44□□□□□ -0.9
SPC25YER018C DSF1P0CX08 502 aa9.43□□□□□ -0.9
SPC25YER018C YNR073CP0CX09 502 aa9.43□□□□□ -0.9
SPC25YER018C HXT2P23585 541 aa9.43□□□□□ -0.9
SPC25YER018C KRE6P32486 720 aa9.43□□□□□ -0.9
SPC25YER018C RIB7P33312 244 aa9.43□□□□□ -0.9
SPC25YER018C APL3P38065 1025 aa9.43□□□□□ -0.9
SPC25YER018C YER084WP40057 128 aa9.43□□□□□ -0.9
SPC25YER018C YNR048WP53740 393 aa9.43□□□□□ -0.9
SPC25YER018C LSM7P53905 115 aaKnown RBP9.43□□□□□ -0.9
SPC25YER018C TGS1Q12052 315 aa9.43□□□□□ -0.9
SPC25YER018C CYC1P00044 109 aaPredicted RBP9.42□□□□□ -0.9
SPC25YER018C AFG1P32317 509 aa9.42□□□□□ -0.9
SPC25YER018C HYM1P32464 399 aa9.42□□□□□ -0.9
SPC25YER018C MTC7P32633 139 aa9.42□□□□□ -0.9
SPC25YER018C SEN34P39707 275 aa9.42□□□□□ -0.9
SPC25YER018C SMB1P40018 196 aaKnown RBP9.42□□□□□ -0.9
SPC25YER018C CAT5P41735 233 aa9.42□□□□□ -0.9
SPC25YER018C GPI14P47088 403 aaKnown RBP9.42□□□□□ -0.9
SPC25YER018C YGL159WP53110 370 aa9.42□□□□□ -0.9
SPC25YER018C FIT3Q08907 204 aa9.42□□□□□ -0.9
SPC25YER018C SRL2Q12020 392 aa9.42□□□□□ -0.9
SPC25YER018C HTZ1Q12692 134 aaKnown RBP9.42□□□□□ -0.9
SPC25YER018C GPM1P00950 247 aaKnown RBP9.41□□□□□ -0.9
SPC25YER018C PET18P25362 215 aa9.41□□□□□ -0.9
SPC25YER018C NAB2P32505 525 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
SPC25YER018C UMP1P38293 148 aa9.41□□□□□ -0.9
SPC25YER018C AIM20P40451 204 aa9.41□□□□□ -0.9
SPC25YER018C SYS1P41544 203 aa9.41□□□□□ -0.9
SPC25YER018C BUD8P41698 603 aa9.41□□□□□ -0.9
SPC25YER018C MSE1P48525 536 aa9.41□□□□□ -0.9
SPC25YER018C PHB2P50085 310 aa9.41□□□□□ -0.9
SPC25YER018C SIP18P50263 79 aa9.41□□□□□ -0.9
SPC25YER018C AVT4P50944 713 aa9.41□□□□□ -0.9
SPC25YER018C TPN1P53099 579 aa9.41□□□□□ -0.9
SPC25YER018C YGR042WP53227 271 aa9.41□□□□□ -0.9
SPC25YER018C FMP48P53233 369 aa9.41□□□□□ -0.9
SPC25YER018C RNH203Q12338 110 aa9.41□□□□□ -0.9
SPC25YER018C ODC2Q99297 307 aa9.41□□□□□ -0.9
SPC25YER018C GCD1P09032 578 aaPredicted RBP9.4□□□□□ -0.9
SPC25YER018C RPL30P14120 105 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C ARO3P14843 370 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C RNP1P32385 249 aa9.4□□□□□ -0.9
SPC25YER018C TCM62P38228 572 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C YIL060WP40519 144 aa9.4□□□□□ -0.9
SPC25YER018C ARO8P53090 500 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C MTL1P53214 551 aa9.4□□□□□ -0.9
SPC25YER018C YPL077CQ02831 240 aa9.4□□□□□ -0.9
SPC25YER018C HAS1Q03532 505 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C KEI1Q06346 221 aa9.4□□□□□ -0.9
SPC25YER018C USB1Q12208 290 aaKnown RBP9.4□□□□□ -0.9
SPC25YER018C YBL010CP32788 280 aa9.39□□□□□ -0.91
SPC25YER018C PPZ2P33329 710 aa9.39□□□□□ -0.91
SPC25YER018C YHR122WP38829 231 aa9.39□□□□□ -0.91
SPC25YER018C PIG2P40187 538 aa9.39□□□□□ -0.91
SPC25YER018C QDR1P40475 563 aa9.39□□□□□ -0.91
SPC25YER018C YKE4P40544 346 aa9.39□□□□□ -0.91
SPC25YER018C BXI1P48558 297 aa9.39□□□□□ -0.91
SPC25YER018C HHT1P61830 136 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms