RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YLR358CO13565 187 aa5.05□□□□□ -1.6
SEC20YDR498C MATALPHA1P0CY06 175 aa5.05□□□□□ -1.6
SEC20YDR498C HMLALPHA1P0CY07 175 aa5.05□□□□□ -1.6
SEC20YDR498C MDH2P22133 377 aa5.05□□□□□ -1.6
SEC20YDR498C RNA14P25298 677 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C PET18P25362 215 aa5.05□□□□□ -1.6
SEC20YDR498C ARO4P32449 370 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C WBP1P33767 430 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C SRP102P36057 244 aaPredicted RBP5.05□□□□□ -1.6
SEC20YDR498C MRPL3P36516 390 aa5.05□□□□□ -1.6
SEC20YDR498C GRE3P38715 327 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SEC20YDR498C GEP4P38812 185 aa5.05□□□□□ -1.6
SEC20YDR498C YER137CP40083 148 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C ATF1P40353 525 aa5.05□□□□□ -1.6
SEC20YDR498C YIL169CP40442 995 aa5.05□□□□□ -1.6
SEC20YDR498C ASK10P48361 1146 aa5.05□□□□□ -1.6
SEC20YDR498C RPL6AQ02326 176 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C NRG1Q03125 231 aa5.05□□□□□ -1.6
SEC20YDR498C CGI121Q03705 181 aaKnown RBP5.05□□□□□ -1.6
SEC20YDR498C VBA1Q04301 562 aa5.05□□□□□ -1.6
SEC20YDR498C MDM30Q05930 598 aa5.05□□□□□ -1.6
SEC20YDR498C CTS2Q06350 511 aa5.05□□□□□ -1.6
SEC20YDR498C RAX1Q08760 435 aa5.05□□□□□ -1.6
SEC20YDR498C YDR215CQ12240 137 aa5.05□□□□□ -1.6
SEC20YDR498C CHO1P08456 276 aa5.04□□□□□ -1.6
SEC20YDR498C STE4P18851 423 aa5.04□□□□□ -1.6
SEC20YDR498C UTR1P21373 530 aa5.04□□□□□ -1.6
SEC20YDR498C MEK1P24719 497 aaPredicted RBP5.04□□□□□ -1.6
SEC20YDR498C CWH43P25618 953 aa5.04□□□□□ -1.6
SEC20YDR498C SPT10P35208 640 aa5.04□□□□□ -1.6
SEC20YDR498C TAT1P38085 619 aa5.04□□□□□ -1.6
SEC20YDR498C TIR3P40552 269 aa5.04□□□□□ -1.6
SEC20YDR498C UBX6P47049 396 aa5.04□□□□□ -1.6
SEC20YDR498C GPI14P47088 403 aaKnown RBP5.04□□□□□ -1.6
SEC20YDR498C AIM25P47140 327 aa5.04□□□□□ -1.6
SEC20YDR498C PMT3P47190 753 aa5.04□□□□□ -1.6
SEC20YDR498C NIT3P49954 291 aa5.04□□□□□ -1.6
SEC20YDR498C OKP1P53298 406 aa5.04□□□□□ -1.6
SEC20YDR498C BSC5P53755 489 aa5.04□□□□□ -1.6
SEC20YDR498C ATG4P53867 494 aa5.04□□□□□ -1.6
SEC20YDR498C SAM50P53969 484 aa5.04□□□□□ -1.6
SEC20YDR498C YDR209CQ03480 137 aa5.04□□□□□ -1.6
SEC20YDR498C YDR249CQ03787 373 aa5.04□□□□□ -1.6
SEC20YDR498C RVB1Q03940 463 aaKnown RBP5.04□□□□□ -1.6
SEC20YDR498C PLP1Q04004 230 aa5.04□□□□□ -1.6
SEC20YDR498C YMR130WQ04223 302 aa5.04□□□□□ -1.6
SEC20YDR498C YLR283WQ05867 314 aa5.04□□□□□ -1.6
SEC20YDR498C RSC58Q07979 502 aa5.04□□□□□ -1.6
SEC20YDR498C SYC1Q08553 188 aaPredicted RBP5.04□□□□□ -1.6
SEC20YDR498C YOR385WQ08909 290 aa5.04□□□□□ -1.6
SEC20YDR498C FMP16Q12497 93 aa5.04□□□□□ -1.6
SEC20YDR498C YGL194C-AQ2V2P6 80 aa5.04□□□□□ -1.6
SEC20YDR498C YPT1P01123 206 aaKnown RBP5.03□□□□□ -1.6
SEC20YDR498C PUT1P09368 476 aa5.03□□□□□ -1.6
SEC20YDR498C DSF1P0CX08 502 aa5.03□□□□□ -1.6
SEC20YDR498C YNR073CP0CX09 502 aa5.03□□□□□ -1.6
SEC20YDR498C YHR214C-DP0CX93 97 aa5.03□□□□□ -1.6
SEC20YDR498C FMT1P32785 401 aa5.03□□□□□ -1.6
SEC20YDR498C FLO10P36170 1169 aa5.03□□□□□ -1.6
SEC20YDR498C APL3P38065 1025 aa5.03□□□□□ -1.6
SEC20YDR498C LEU5P38702 357 aa5.03□□□□□ -1.6
SEC20YDR498C SHO1P40073 367 aa5.03□□□□□ -1.6
SEC20YDR498C PUG1P40100 303 aa5.03□□□□□ -1.6
SEC20YDR498C REE1P40893 198 aa5.03□□□□□ -1.6
SEC20YDR498C NIT2P47016 307 aa5.03□□□□□ -1.6
SEC20YDR498C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SEC20YDR498C MIX14Q04341 121 aa5.03□□□□□ -1.6
SEC20YDR498C YLR224WQ05947 369 aa5.03□□□□□ -1.6
SEC20YDR498C RRP15Q06511 250 aaPredicted RBP5.03□□□□□ -1.6
SEC20YDR498C BBP1Q12365 385 aa5.03□□□□□ -1.6
SEC20YDR498C ODC2Q99297 307 aa5.03□□□□□ -1.6
SEC20YDR498C GCN1P33892 2672 aaKnown RBP5.03□□□□□ -1.6
SEC20YDR498C COX5BP00425 151 aa5.02□□□□□ -1.61
SEC20YDR498C MES1P00958 751 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C CDC23P16522 626 aa5.02□□□□□ -1.61
SEC20YDR498C ATG15P25641 520 aa5.02□□□□□ -1.61
SEC20YDR498C NAM9P27929 486 aa5.02□□□□□ -1.61
SEC20YDR498C CAM1P29547 415 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C ITR1P30605 584 aa5.02□□□□□ -1.61
SEC20YDR498C YKR073CP36153 106 aa5.02□□□□□ -1.61
SEC20YDR498C MRPL27P36526 146 aaPredicted RBP5.02□□□□□ -1.61
SEC20YDR498C FRM2P37261 193 aa5.02□□□□□ -1.61
SEC20YDR498C SSH1P38353 490 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C RRF1P38771 230 aa5.02□□□□□ -1.61
SEC20YDR498C MTC6P38849 526 aa5.02□□□□□ -1.61
SEC20YDR498C SMB1P40018 196 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C ECO1P43605 281 aa5.02□□□□□ -1.61
SEC20YDR498C BXI1P48558 297 aa5.02□□□□□ -1.61
SEC20YDR498C POP6P53218 158 aa5.02□□□□□ -1.61
SEC20YDR498C SCW4P53334 386 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C AAH1P53909 347 aa5.02□□□□□ -1.61
SEC20YDR498C YPL039WQ03080 316 aa5.02□□□□□ -1.61
SEC20YDR498C SDC1Q03323 175 aa5.02□□□□□ -1.61
SEC20YDR498C NNT1Q05874 261 aa5.02□□□□□ -1.61
SEC20YDR498C LUC7Q07508 261 aaPredicted RBP5.02□□□□□ -1.61
SEC20YDR498C NIP7Q08962 181 aaKnown RBP5.02□□□□□ -1.61
SEC20YDR498C RDI1Q12434 202 aa5.02□□□□□ -1.61
SEC20YDR498C YBR056W-AI2HB52 66 aa5.01□□□□□ -1.61
SEC20YDR498C TDH2P00358 332 aaKnown RBP5.01□□□□□ -1.61
SEC20YDR498C RPL6BP05739 176 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms