RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PAL1	YDR348C	HXT4	P32467	576 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	GPI16	P38875	610 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	PAU15	P40585	124 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	HXT14	P42833	540 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	PMT6	P42934	759 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	YJR056C	P47115	236 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	BAT2	P47176	376 aa	Known RBP	4.54	□□□□□ -1.68
PAL1	YDR348C	YJR149W	P47177	404 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	MRX6	P48564	524 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	MDM34	P53083	459 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	COQ6	P53318	479 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	MTQ1	P53944	314 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	STD1	Q02794	444 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	MSC1	Q03104	513 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	RRT7	Q07829	113 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	COX19	Q3E731	98 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	YNR034W-A	Q3E841	98 aa		4.54	□□□□□ -1.68
PAL1	YDR348C	PNO1	Q99216	274 aa	Known RBP	4.54	□□□□□ -1.68
PAL1	YDR348C	MEX67	Q99257	599 aa	Known RBP	4.54	□□□□□ -1.68
PAL1	YDR348C	TPI1	P00942	248 aa	Known RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	HIP1	P06775	603 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PAL1	YDR348C	YOL162W	P0CF19	215 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	HNM1	P19807	563 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	ERG4	P25340	473 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	TRX3	P25372	127 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	ADH7	P25377	361 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	PUT3	P25502	979 aa	Predicted RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	PBN1	P25580	416 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	KRR1	P25586	316 aa	Predicted RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	ATG15	P25641	520 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	DSS4	P32601	143 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	PAN3	P36102	679 aa	Predicted RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	GMH1	P36125	273 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	POP7	P38291	140 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	YMR262W	P38430	313 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	YER158C	P40095	573 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	MMF1	P40185	145 aa	Known RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	UFE1	P41834	346 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	OTU1	P43558	301 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	YAP1802	P53309	568 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	PIR3	Q03180	325 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	RSM10	Q03201	203 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	SEC13	Q04491	297 aa	Known RBP	4.53	□□□□□ -1.68
PAL1	YDR348C	BSP1	Q06604	576 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	SRO7	Q12038	1033 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	FYV7	Q12247	151 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	COA6	Q3E846	104 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	YOR338W	Q99326	363 aa		4.53	□□□□□ -1.68
PAL1	YDR348C	CYC7	P00045	113 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RPL9A	P05738	191 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	SGA1	P08019	549 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RIP1	P08067	215 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	ATP5	P09457	212 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RPL31A	P0C2H8	113 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	RPL31B	P0C2H9	113 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	MATALPHA1	P0CY06	175 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	HMLALPHA1	P0CY07	175 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	YCR100C	P25606	316 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	COQ3	P27680	312 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	LAC1	P28496	418 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	EHD3	P28817	500 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	PRO1	P32264	428 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	YEF1	P32622	495 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	TIM23	P32897	222 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	CSE2	P33308	149 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	PRP18	P33411	251 aa	Predicted RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	BET3	P36149	193 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	OMA1	P36163	345 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	MRPL11	P36521	249 aa	Predicted RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	RIB5	P38145	238 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	CHK1	P38147	527 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	BNA4	P38169	460 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	SHG1	P38337	142 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	CHS7	P38843	316 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	TIM17	P39515	158 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	PRP39	P39682	629 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	VPS52	P39904	641 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	GAT2	P40209	560 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	LYS12	P40495	371 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	YIL060W	P40519	144 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	MOB2	P43563	287 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RPA34	P47006	233 aa	Predicted RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	EAF6	P47128	113 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	AMA1	P50082	593 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	UBP8	P50102	471 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RPL9B	P51401	191 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	YGR117C	P53270	476 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	ACT1	P60010	375 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	BUD25	P85052	153 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	CWC27	Q02770	301 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	RCR2	Q03446	210 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	SPC19	Q03954	165 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	ATC1	Q04005	294 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	YFT2	Q06676	274 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	YOR365C	Q08844	703 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	TPO4	Q12256	659 aa		4.52	□□□□□ -1.69
PAL1	YDR348C	PDH1	Q12428	516 aa	Known RBP	4.52	□□□□□ -1.69
PAL1	YDR348C	COX9	P07255	59 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms