RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C IZH2Q12442 317 aa4.87□□□□□ -1.63
MSS116YDR194C PPH21P23594 369 aa4.87□□□□□ -1.63
MSS116YDR194C YCR025CP25352 136 aa4.87□□□□□ -1.63
MSS116YDR194C SGE1P33335 543 aa4.87□□□□□ -1.63
MSS116YDR194C SUR2P38992 349 aa4.87□□□□□ -1.63
MSS116YDR194C YER186CP40101 306 aa4.87□□□□□ -1.63
MSS116YDR194C SNZ3P43545 298 aa4.87□□□□□ -1.63
MSS116YDR194C BIR1P47134 954 aa4.87□□□□□ -1.63
MSS116YDR194C PRM15Q03262 622 aa4.87□□□□□ -1.63
MSS116YDR194C YDL144CQ07589 356 aa4.87□□□□□ -1.63
MSS116YDR194C SNA3P14359 133 aa4.86□□□□□ -1.63
MSS116YDR194C FRM2P37261 193 aa4.86□□□□□ -1.63
MSS116YDR194C SHE1P38200 338 aa4.86□□□□□ -1.63
MSS116YDR194C AVT7P40501 490 aa4.86□□□□□ -1.63
MSS116YDR194C YLR177WQ06251 628 aa4.86□□□□□ -1.63
MSS116YDR194C VIK1Q12045 647 aa4.86□□□□□ -1.63
MSS116YDR194C ERV2Q12284 196 aa4.86□□□□□ -1.63
MSS116YDR194C YKR104WP0CE69 306 aa4.85□□□□□ -1.63
MSS116YDR194C ACP1P32463 125 aa4.85□□□□□ -1.63
MSS116YDR194C UBC6P33296 250 aaPredicted RBP4.85□□□□□ -1.63
MSS116YDR194C YHL049CP38722 271 aa4.85□□□□□ -1.63
MSS116YDR194C MTW1P39731 289 aa4.85□□□□□ -1.63
MSS116YDR194C IRC18P47056 224 aa4.85□□□□□ -1.63
MSS116YDR194C MCM22P47167 239 aa4.85□□□□□ -1.63
MSS116YDR194C OST3P48439 350 aa4.85□□□□□ -1.63
MSS116YDR194C COG7P53195 279 aa4.85□□□□□ -1.63
MSS116YDR194C YGR067CP53243 804 aa4.85□□□□□ -1.63
MSS116YDR194C SPG4Q04438 115 aa4.85□□□□□ -1.63
MSS116YDR194C SEI1Q06058 285 aa4.85□□□□□ -1.63
MSS116YDR194C TPO4Q12256 659 aa4.85□□□□□ -1.63
MSS116YDR194C CKA2P19454 339 aa4.85□□□□□ -1.63
MSS116YDR194C SEN34P39707 275 aa4.85□□□□□ -1.63
MSS116YDR194C YJR141WP47172 347 aaPredicted RBP4.85□□□□□ -1.63
MSS116YDR194C PRP24P49960 444 aaKnown RBP4.85□□□□□ -1.63
MSS116YDR194C TOS8P53147 276 aa4.85□□□□□ -1.63
MSS116YDR194C FDH1Q08911 376 aa4.85□□□□□ -1.63
MSS116YDR194C ASP3-2P0CX77 362 aa4.84□□□□□ -1.63
MSS116YDR194C ASP3-3P0CX78 362 aa4.84□□□□□ -1.63
MSS116YDR194C ASP3-4P0CX79 362 aa4.84□□□□□ -1.63
MSS116YDR194C ASP3-1P0CZ17 362 aa4.84□□□□□ -1.63
MSS116YDR194C DPB2P24482 689 aaPredicted RBP4.84□□□□□ -1.63
MSS116YDR194C YCR087C-AP37263 153 aa4.84□□□□□ -1.63
MSS116YDR194C YER121WP40076 114 aa4.84□□□□□ -1.63
MSS116YDR194C CPR7P47103 393 aa4.84□□□□□ -1.63
MSS116YDR194C FYV6P53913 173 aa4.84□□□□□ -1.63
MSS116YDR194C PBA1Q05778 276 aa4.84□□□□□ -1.63
MSS116YDR194C YMR316C-AI2HB70 103 aa4.84□□□□□ -1.64
MSS116YDR194C URA6P15700 204 aa4.84□□□□□ -1.64
MSS116YDR194C CDC50P25656 391 aa4.84□□□□□ -1.64
MSS116YDR194C MRPL3P36516 390 aa4.84□□□□□ -1.64
MSS116YDR194C BRR6P53062 197 aa4.84□□□□□ -1.64
MSS116YDR194C YGL039WP53183 348 aaKnown RBP4.84□□□□□ -1.64
MSS116YDR194C FMP41P53889 259 aaKnown RBP4.84□□□□□ -1.64
MSS116YDR194C SRY1P36007 326 aa4.83□□□□□ -1.64
MSS116YDR194C GRE3P38715 327 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
MSS116YDR194C PTH1P38876 190 aaKnown RBP4.83□□□□□ -1.64
MSS116YDR194C ELP3Q02908 557 aaKnown RBP4.83□□□□□ -1.64
MSS116YDR194C YPL113CQ02961 396 aa4.83□□□□□ -1.64
MSS116YDR194C YPL278CQ08990 100 aa4.83□□□□□ -1.64
MSS116YDR194C CAM1P29547 415 aaKnown RBP4.82□□□□□ -1.64
MSS116YDR194C SPS18P32572 300 aa4.82□□□□□ -1.64
MSS116YDR194C FES1P38260 290 aa4.82□□□□□ -1.64
MSS116YDR194C BAT1P38891 393 aaKnown RBP4.82□□□□□ -1.64
MSS116YDR194C SSU72P53538 206 aaPredicted RBP4.82□□□□□ -1.64
MSS116YDR194C BGL2P15703 313 aaKnown RBP4.82□□□□□ -1.64
MSS116YDR194C STB1P42845 420 aa4.82□□□□□ -1.64
MSS116YDR194C MMS2P53152 137 aa4.82□□□□□ -1.64
MSS116YDR194C SYF2P53277 215 aaPredicted RBP4.82□□□□□ -1.64
MSS116YDR194C YPR147CQ06522 304 aaKnown RBP4.82□□□□□ -1.64
MSS116YDR194C YPL150WQ12152 901 aa4.82□□□□□ -1.64
MSS116YDR194C VPH2P32341 215 aa4.81□□□□□ -1.64
MSS116YDR194C OXA1P39952 402 aa4.81□□□□□ -1.64
MSS116YDR194C COG3P40094 801 aa4.81□□□□□ -1.64
MSS116YDR194C REE1P40893 198 aa4.81□□□□□ -1.64
MSS116YDR194C HRI1Q05905 244 aaKnown RBP4.81□□□□□ -1.64
MSS116YDR194C YNG1Q08465 219 aa4.81□□□□□ -1.64
MSS116YDR194C MRX4Q12467 430 aa4.81□□□□□ -1.64
MSS116YDR194C YPL229WQ99395 206 aa4.81□□□□□ -1.64
MSS116YDR194C DRE2P36152 348 aa4.8□□□□□ -1.64
MSS116YDR194C SRP14P38985 146 aa4.8□□□□□ -1.64
MSS116YDR194C PDR17P53844 350 aa4.8□□□□□ -1.64
MSS116YDR194C YNL140CP53910 189 aa4.8□□□□□ -1.64
MSS116YDR194C SNO1Q03144 224 aa4.8□□□□□ -1.64
MSS116YDR194C DXO1Q06349 442 aa4.8□□□□□ -1.64
MSS116YDR194C IRC25Q07951 179 aa4.8□□□□□ -1.64
MSS116YDR194C RRP40Q08285 240 aaKnown RBP4.8□□□□□ -1.64
MSS116YDR194C RPL21BQ12672 160 aaKnown RBP4.8□□□□□ -1.64
MSS116YDR194C MET2P08465 486 aa4.8□□□□□ -1.64
MSS116YDR194C DBF2P22204 572 aa4.8□□□□□ -1.64
MSS116YDR194C RFS1P38234 210 aaKnown RBP4.8□□□□□ -1.64
MSS116YDR194C TIM17P39515 158 aa4.8□□□□□ -1.64
MSS116YDR194C YFL064CP43540 174 aa4.8□□□□□ -1.64
MSS116YDR194C SLX9P53251 210 aaPredicted RBP4.8□□□□□ -1.64
MSS116YDR194C YET3Q07451 203 aa4.8□□□□□ -1.64
MSS116YDR194C RFT1P38206 574 aaPredicted RBP4.79□□□□□ -1.64
MSS116YDR194C YMR144WP40214 342 aaKnown RBP4.79□□□□□ -1.64
MSS116YDR194C YKE4P40544 346 aa4.79□□□□□ -1.64
MSS116YDR194C RNH201P53942 307 aa4.79□□□□□ -1.64
MSS116YDR194C NDD1Q08887 554 aa4.79□□□□□ -1.64
MSS116YDR194C PPT2Q12036 173 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms