RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	RIB5	P38145	238 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	MIX23	P38162	196 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	ARN2	P38724	620 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	KRE29	P40026	464 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	PMT4	P46971	762 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	BIO3	P50277	480 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	YGL101W	P53144	215 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	SED5	Q01590	340 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	RNH1	Q04740	348 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	YMR310C	Q04867	317 aa	Predicted RBP	4.06	□□□□□ -1.76
NUP42	YDR192C	YLR030W	Q07967	263 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	HNT3	Q08702	217 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	UBR1	P19812	1950 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	TIM9	O74700	87 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	ILV5	P06168	395 aa	Known RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	RHO1	P06780	209 aa	Known RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	PBN1	P25580	416 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	TAH1	P25638	111 aa	Predicted RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	SKN1	P33336	771 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	MRPL15	P36523	253 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	YBR063C	P38083	404 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	ECM8	P38246	354 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	TRR2	P38816	342 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	PFS1	P38872	237 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	MNL1	P38888	796 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	AIM2	P39721	246 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	AST2	P39945	430 aa	Known RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	SOK1	P40317	901 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	MPM1	P40364	252 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	YIL067C	P40514	678 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	IBA57	P47158	497 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	MPC1	P53157	130 aa	Known RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	ABZ2	Q03266	374 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	YMD8	Q03697	442 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	YML096W	Q04489	525 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	RRP9	Q06506	573 aa	Known RBP	4.05	□□□□□ -1.76
NUP42	YDR192C	SRL2	Q12020	392 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	YLR108C	Q12259	485 aa		4.05	□□□□□ -1.76
NUP42	YDR192C	KRR1	P25586	316 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
NUP42	YDR192C	AGA1	P32323	725 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	MKK1	P32490	508 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	TAF14	P35189	244 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	DAD2	P36162	133 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	ATP3	P38077	311 aa	Known RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	RPS20	P38701	121 aa	Known RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	STP2	P38704	541 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	SBE22	P38814	852 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	WSS1	P38838	269 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	SOP4	P39543	234 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	COG3	P40094	801 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	JLP2	P40206	208 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	RPL10	P41805	221 aa	Known RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	BAT2	P47176	376 aa	Known RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	RRP17	Q04031	235 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	YLR446W	Q06204	433 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	YDL114W	Q07530	308 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	TPT1	Q12272	230 aa	Known RBP	4.04	□□□□□ -1.76
NUP42	YDR192C	PCL9	Q12477	304 aa		4.04	□□□□□ -1.76
NUP42	YDR192C	PHO2	P07269	559 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	SNF6	P18888	332 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	OAC1	P32332	324 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	SUR1	P33300	382 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	LHP1	P33399	275 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	YHR035W	P38769	630 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	MTC6	P38849	526 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	YER079W	P40052	210 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	AVT6	P40074	448 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	DBP6	P53734	629 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	WSC2	P53832	503 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	RHO5	P53879	331 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	STD1	Q02794	444 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	SMP3	Q04174	516 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	SMA2	Q04658	369 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	NAT4	Q04751	285 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	YMR315W	Q04869	349 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	RNH202	Q05635	350 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	NDE2	Q07500	545 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	MMT2	Q08970	484 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	THP3	Q12049	470 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	NFI1	Q12216	726 aa		4.03	□□□□□ -1.76
NUP42	YDR192C	PST2	Q12335	198 aa	Known RBP	4.03	□□□□□ -1.76
NUP42	YDR192C	DPM1	P14020	267 aa	Known RBP	4.02	□□□□□ -1.77
NUP42	YDR192C	PHO80	P20052	293 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	CPR3	P25719	182 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	CWP1	P28319	239 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	ITR2	P30606	609 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	GPX1	P36014	167 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	TPO5	P36029	618 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	YER184C	P39961	794 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	RRG9	P40156	214 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	AIM20	P40451	204 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	OST1	P41543	476 aa	Known RBP	4.02	□□□□□ -1.77
NUP42	YDR192C	SFH5	P47008	294 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	COS1	P53822	381 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	TPS1	Q00764	495 aa	Known RBP	4.02	□□□□□ -1.77
NUP42	YDR192C	YMR099C	Q03161	297 aa	Known RBP	4.02	□□□□□ -1.77
NUP42	YDR192C	TDA1	Q03533	586 aa		4.02	□□□□□ -1.77
NUP42	YDR192C	GPN3	Q06543	272 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms