RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C TGS1Q12052 315 aa5.76□□□□□ -1.49
LDB7YBL006C USB1Q12208 290 aaKnown RBP5.76□□□□□ -1.49
LDB7YBL006C RPL30P14120 105 aaKnown RBP5.75□□□□□ -1.49
LDB7YBL006C SAG1P20840 650 aa5.75□□□□□ -1.49
LDB7YBL006C PUT3P25502 979 aaPredicted RBP5.75□□□□□ -1.49
LDB7YBL006C AIM10P39965 576 aaKnown RBP5.75□□□□□ -1.49
LDB7YBL006C RMD6P39975 231 aa5.75□□□□□ -1.49
LDB7YBL006C SDP1P40479 209 aa5.75□□□□□ -1.49
LDB7YBL006C CCC1P47818 322 aa5.75□□□□□ -1.49
LDB7YBL006C GCD1P09032 578 aaPredicted RBP5.74□□□□□ -1.49
LDB7YBL006C FAR1P21268 830 aa5.74□□□□□ -1.49
LDB7YBL006C IDP1P21954 428 aaKnown RBP5.74□□□□□ -1.49
LDB7YBL006C ZRT3P34240 503 aa5.74□□□□□ -1.49
LDB7YBL006C SHE1P38200 338 aa5.74□□□□□ -1.49
LDB7YBL006C SLM1P40485 686 aa5.74□□□□□ -1.49
LDB7YBL006C MDJ2P42834 146 aa5.74□□□□□ -1.49
LDB7YBL006C PHB2P50085 310 aa5.74□□□□□ -1.49
LDB7YBL006C PRP11Q07350 266 aaPredicted RBP5.74□□□□□ -1.49
LDB7YBL006C FRE3Q08905 711 aa5.74□□□□□ -1.49
LDB7YBL006C THP3Q12049 470 aaKnown RBP5.74□□□□□ -1.49
LDB7YBL006C YOR029WQ12243 111 aa5.74□□□□□ -1.49
LDB7YBL006C SIR2P06700 562 aa5.73□□□□□ -1.49
LDB7YBL006C YGL041W-AP0C5N3 154 aa5.73□□□□□ -1.49
LDB7YBL006C HXT2P23585 541 aa5.73□□□□□ -1.49
LDB7YBL006C AFG1P32317 509 aa5.73□□□□□ -1.49
LDB7YBL006C IES6P32617 166 aa5.73□□□□□ -1.49
LDB7YBL006C YKL102CP34249 101 aa5.73□□□□□ -1.49
LDB7YBL006C THI2P38141 450 aa5.73□□□□□ -1.49
LDB7YBL006C PEX32P38292 413 aa5.73□□□□□ -1.49
LDB7YBL006C SOP4P39543 234 aaPredicted RBP5.73□□□□□ -1.49
LDB7YBL006C GON7P46984 123 aa5.73□□□□□ -1.49
LDB7YBL006C TAF4P50105 388 aa5.73□□□□□ -1.49
LDB7YBL006C YGL159WP53110 370 aa5.73□□□□□ -1.49
LDB7YBL006C NSA1P53136 463 aaPredicted RBP5.73□□□□□ -1.49
LDB7YBL006C NRK1P53915 240 aa5.73□□□□□ -1.49
LDB7YBL006C YDR248CQ03786 193 aa5.73□□□□□ -1.49
LDB7YBL006C FIN1Q03898 291 aa5.73□□□□□ -1.49
LDB7YBL006C UTP15Q04305 513 aaKnown RBP5.73□□□□□ -1.49
LDB7YBL006C RBS1Q05672 457 aaKnown RBP5.73□□□□□ -1.49
LDB7YBL006C YLR173WQ06247 608 aa5.73□□□□□ -1.49
LDB7YBL006C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
LDB7YBL006C VCX1Q99385 411 aa5.73□□□□□ -1.49
LDB7YBL006C PRP21P32524 280 aaPredicted RBP5.72□□□□□ -1.49
LDB7YBL006C SDS22P36047 338 aa5.72□□□□□ -1.49
LDB7YBL006C ANR2P36090 516 aaPredicted RBP5.72□□□□□ -1.49
LDB7YBL006C TCM62P38228 572 aaKnown RBP5.72□□□□□ -1.49
LDB7YBL006C YBR285WP38354 144 aa5.72□□□□□ -1.49
LDB7YBL006C LNP1P38878 278 aa5.72□□□□□ -1.49
LDB7YBL006C EGD2P38879 174 aaKnown RBP5.72□□□□□ -1.49
LDB7YBL006C MDM31P38880 579 aa5.72□□□□□ -1.49
LDB7YBL006C YER079WP40052 210 aaKnown RBP5.72□□□□□ -1.49
LDB7YBL006C PMT6P42934 759 aa5.72□□□□□ -1.49
LDB7YBL006C SLI1P53304 468 aa5.72□□□□□ -1.49
LDB7YBL006C YLR152CP54072 576 aa5.72□□□□□ -1.49
LDB7YBL006C YKR005CQ02203 525 aa5.72□□□□□ -1.49
LDB7YBL006C YDR514CQ04408 483 aa5.72□□□□□ -1.49
LDB7YBL006C IRC25Q07951 179 aa5.72□□□□□ -1.49
LDB7YBL006C TAF3Q12297 353 aa5.72□□□□□ -1.49
LDB7YBL006C TDH2P00358 332 aaKnown RBP5.71□□□□□ -1.5
LDB7YBL006C SGA1P08019 549 aa5.71□□□□□ -1.5
LDB7YBL006C PIC2P40035 300 aa5.71□□□□□ -1.5
LDB7YBL006C DLS1P40366 167 aa5.71□□□□□ -1.5
LDB7YBL006C ARG5,6Q01217 863 aa5.71□□□□□ -1.5
LDB7YBL006C CAC2Q04199 468 aa5.71□□□□□ -1.5
LDB7YBL006C SPR28Q04921 423 aa5.71□□□□□ -1.5
LDB7YBL006C PIN3Q06449 215 aa5.71□□□□□ -1.5
LDB7YBL006C FCY22Q12119 530 aa5.71□□□□□ -1.5
LDB7YBL006C YDL009CQ12210 107 aa5.71□□□□□ -1.5
LDB7YBL006C YGK3Q12222 375 aaPredicted RBP5.71□□□□□ -1.5
LDB7YBL006C FRE6Q12473 712 aa5.71□□□□□ -1.5
LDB7YBL006C YMR105W-AQ8TGS8 64 aa5.71□□□□□ -1.5
LDB7YBL006C MRPS28P21771 286 aa5.7□□□□□ -1.5
LDB7YBL006C ACH1P32316 526 aa5.7□□□□□ -1.5
LDB7YBL006C PPZ2P33329 710 aa5.7□□□□□ -1.5
LDB7YBL006C MKS1P34072 584 aa5.7□□□□□ -1.5
LDB7YBL006C YND1P40009 630 aa5.7□□□□□ -1.5
LDB7YBL006C ERJ5P43613 295 aaPredicted RBP5.7□□□□□ -1.5
LDB7YBL006C LYS20P48570 428 aaKnown RBP5.7□□□□□ -1.5
LDB7YBL006C UFD1P53044 361 aa5.7□□□□□ -1.5
LDB7YBL006C SLD3P53135 668 aa5.7□□□□□ -1.5
LDB7YBL006C WSC2P53832 503 aa5.7□□□□□ -1.5
LDB7YBL006C YPL067CQ02754 198 aa5.7□□□□□ -1.5
LDB7YBL006C HLR1Q04429 423 aa5.7□□□□□ -1.5
LDB7YBL006C TSR2Q06672 205 aaKnown RBP5.7□□□□□ -1.5
LDB7YBL006C GSH2Q08220 491 aa5.7□□□□□ -1.5
LDB7YBL006C LYS21Q12122 440 aaKnown RBP5.7□□□□□ -1.5
LDB7YBL006C YOL114CQ12322 202 aa5.7□□□□□ -1.5
LDB7YBL006C ENA1P13587 1091 aa5.69□□□□□ -1.5
LDB7YBL006C DAL3P32459 195 aa5.69□□□□□ -1.5
LDB7YBL006C TIF3P34167 436 aaKnown RBP5.69□□□□□ -1.5
LDB7YBL006C MTH1P35198 433 aa5.69□□□□□ -1.5
LDB7YBL006C ALG14P38242 237 aa5.69□□□□□ -1.5
LDB7YBL006C SDS24P38314 527 aa5.69□□□□□ -1.5
LDB7YBL006C SSH1P38353 490 aaKnown RBP5.69□□□□□ -1.5
LDB7YBL006C YLF2P38746 405 aa5.69□□□□□ -1.5
LDB7YBL006C ILM1P47155 203 aa5.69□□□□□ -1.5
LDB7YBL006C AVT4P50944 713 aa5.69□□□□□ -1.5
LDB7YBL006C PMT5P52867 743 aa5.69□□□□□ -1.5
LDB7YBL006C PAU12P53343 120 aa5.69□□□□□ -1.5
LDB7YBL006C ENA2Q01896 1091 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms