RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 GDAQ9Y2T3 454 aa20.85■□□□□ 0.93
CLN6-221ENST00000637494 SF3B1O75533 1304 aaKnown RBP eCLIP20.84■□□□□ 0.938e-9■■■■■ 155.1
CLN6-221ENST00000637494 VPS37CA5D8V6 355 aaPredicted RBP20.84■□□□□ 0.93
CLN6-221ENST00000637494 LILRB3O75022 631 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 UBA7P41226 1012 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 YARSP54577 528 aaKnown RBP20.84■□□□□ 0.93
CLN6-221ENST00000637494 DSG1Q02413 1049 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 HYIQ5T013 277 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 EEF1DP3Q658K8 133 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 C1orf186Q6ZWK4 172 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 C12orf76Q8N812 135 aaPredicted RBP20.84■□□□□ 0.93
CLN6-221ENST00000637494 RASSF8Q8NHQ8 419 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 RUSC1Q9BVN2 902 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 POMKQ9H5K3 350 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 KCND2Q9NZV8 630 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 RAPGEFL1Q9UHV5 662 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 USP20Q9Y2K6 914 aa20.84■□□□□ 0.93
CLN6-221ENST00000637494 ARIH1Q9Y4X5 557 aaPredicted RBP20.84■□□□□ 0.93
CLN6-221ENST00000637494 GLUD1P00367 558 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 SP100P23497 879 aaPredicted RBP20.83■□□□□ 0.93
CLN6-221ENST00000637494 STRN3Q13033 797 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 ZNF568Q3ZCX4 644 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 NT5DC1Q5TFE4 455 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 KIAA0319Q5VV43 1072 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 TAS1R1Q7RTX1 841 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 KCNK18Q7Z418 384 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 GPR65Q8IYL9 337 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 RNF168Q8IYW5 571 aaPredicted RBP20.83■□□□□ 0.93
CLN6-221ENST00000637494 SYT2Q8N9I0 419 aaPredicted RBP20.83■□□□□ 0.93
CLN6-221ENST00000637494 PLIN2Q99541 437 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 TCHPQ9BT92 498 aa20.83■□□□□ 0.93
CLN6-221ENST00000637494 CCDC94Q9BW85 323 aaPredicted RBP20.83■□□□□ 0.93
CLN6-221ENST00000637494 TOPORSQ9NS56 1045 aaPredicted RBP20.83■□□□□ 0.93
CLN6-221ENST00000637494 CASTOR2A6NHX0 329 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 PLA2G4BP0C869 781 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 ZXDAP98168 799 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 ELAVL2Q12926 359 aaKnown RBP20.82■□□□□ 0.92
CLN6-221ENST00000637494 CUL4AQ13619 759 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 TMC5Q6UXY8 1006 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 TDRD5Q8NAT2 981 aaKnown RBP20.82■□□□□ 0.92
CLN6-221ENST00000637494 FAM122AQ96E09 287 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 MFSD14AQ96MC6 490 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 PNMA5Q96PV4 448 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 RXFP1Q9HBX9 757 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 CHST7Q9NS84 486 aa20.82■□□□□ 0.92
CLN6-221ENST00000637494 F8W810 466 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 H0YCG3 227 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 TEX28O15482 410 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 EDN1P05305 212 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 WEE2P0C1S8 567 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 RAD51AP2Q09MP3 1159 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 GPR149Q86SP6 731 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 DAW1Q8N136 415 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 RIN2Q8WYP3 895 aaPredicted RBP20.81■□□□□ 0.92
CLN6-221ENST00000637494 RABGGTAQ92696 567 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 ACSF2Q96CM8 615 aaPredicted RBP20.81■□□□□ 0.92
CLN6-221ENST00000637494 ACO2Q99798 780 aaKnown RBP20.81■□□□□ 0.92
CLN6-221ENST00000637494 GPR62Q9BZJ7 368 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 MAN1C1Q9NR34 630 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 LARSQ9P2J5 1176 aaKnown RBP20.81■□□□□ 0.92
CLN6-221ENST00000637494 ARHGAP28Q9P2N2 729 aa20.81■□□□□ 0.92
CLN6-221ENST00000637494 SFI1A8K8P3 1242 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 PTGESO14684 152 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 SLC16A4O15374 487 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 EFEMP2O95967 443 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 C1RP00736 705 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 PLS3P13797 630 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 LONP1P36776 959 aaKnown RBP20.8■□□□□ 0.92
CLN6-221ENST00000637494 GRM5P41594 1212 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 PTPN21Q16825 1174 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 PDXDC1Q6P996 788 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 C15orf39Q6ZRI6 1047 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 TRIM67Q6ZTA4 783 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 CCDC149Q6ZUS6 474 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 SPIRE2Q8WWL2 714 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 UROC1Q96N76 676 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 NTPCRQ9BSD7 190 aaKnown RBP20.8■□□□□ 0.92
CLN6-221ENST00000637494 FNIP2Q9P278 1114 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 CDH22Q9UJ99 828 aa20.8■□□□□ 0.92
CLN6-221ENST00000637494 MCF2P10911 925 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 SLC12A3P55017 1021 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 MAPK7Q13164 816 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 SF3A1Q15459 793 aaKnown RBP20.79■□□□□ 0.92
CLN6-221ENST00000637494 TMEM119Q4V9L6 283 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 KANK3Q6NY19 840 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 CYP26C1Q6V0L0 522 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 CEP57Q86XR8 500 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 HASPINQ8TF76 798 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 TTPALQ9BTX7 342 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 TARS2Q9BW92 718 aaKnown RBP20.79■□□□□ 0.92
CLN6-221ENST00000637494 BACH2Q9BYV9 841 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 CDT1Q9H211 546 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 SLC38A7Q9NVC3 462 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 USTQ9Y2C2 406 aa20.79■□□□□ 0.92
CLN6-221ENST00000637494 TMEM221A6NGB7 291 aa20.78■□□□□ 0.92
CLN6-221ENST00000637494 C2CD4DB7Z1M9 353 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms