RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 THP07101 528 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 HOXB8P17481 243 aaPredicted RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 PLCG1P19174 1290 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 KLRC2P26717 231 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 TUSC3Q13454 348 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 KCNC3Q14003 757 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 PTPN14Q15678 1187 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 ZBTB33Q86T24 672 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 ACO2Q99798 780 aaKnown RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 TARS2Q9BW92 718 aaKnown RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 MARCH5Q9NX47 278 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 LARSQ9P2J5 1176 aaKnown RBP15.16■□□□□ 0.02
PNKP-228ENST00000637325 CCDC39Q9UFE4 941 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
PNKP-228ENST00000637325 H0YCG3 227 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 FAM13AO94988 1023 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 TXLNAP40222 546 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
PNKP-228ENST00000637325 MCM6Q14566 821 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 PTPAQ15257 358 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 CES5AQ6NT32 575 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 SYCE2Q6PIF2 218 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 RAD54LQ92698 747 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 KLHL5Q96PQ7 755 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 NTPCRQ9BSD7 190 aaKnown RBP15.15■□□□□ 0.02
PNKP-228ENST00000637325 CCDC94Q9BW85 323 aaPredicted RBP15.15■□□□□ 0.02
PNKP-228ENST00000637325 C1QTNF1Q9BXJ1 281 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 ZHX3Q9H4I2 956 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 EPHX3Q9H6B9 360 aa15.15■□□□□ 0.02
PNKP-228ENST00000637325 SRPRBQ9Y5M8 271 aaKnown RBP15.15■□□□□ 0.02
PNKP-228ENST00000637325 CASTOR2A6NHX0 329 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 HARSP12081 509 aaKnown RBP15.14■□□□□ 0.01
PNKP-228ENST00000637325 MATR3P43243 847 aaKnown RBP eCLIP15.14■□□□□ 0.01
PNKP-228ENST00000637325 GLUD2P49448 558 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 OSTNP61366 133 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
PNKP-228ENST00000637325 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 FUT10Q6P4F1 479 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 TAS1R3Q7RTX0 852 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 TAS1R1Q7RTX1 841 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 MYCT1Q8N699 235 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 BICD1Q96G01 975 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 EPSTI1Q96J88 318 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 REEP2Q9BRK0 252 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 PHF7Q9BWX1 381 aaPredicted RBP15.14■□□□□ 0.01
PNKP-228ENST00000637325 CDT1Q9H211 546 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 S1PR5Q9H228 398 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
PNKP-228ENST00000637325 BLOC1S4Q9NUP1 217 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 DZANK1Q9NVP4 752 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
PNKP-228ENST00000637325 ADAM28Q9UKQ2 775 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 ODF2LQ9ULJ1 636 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 C2orf16Q68DN1 1984 aa15.14■□□□□ 0.01
PNKP-228ENST00000637325 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 F8W810 466 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 PTGESO14684 152 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 TBCAO75347 108 aaKnown RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 CNPP09543 421 aaKnown RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 MCF2P10911 925 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 ALADP13716 330 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 EPCAMP16422 314 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 DDIT3P35638 169 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 GRM5P41594 1212 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 STK38Q15208 465 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 USP41Q3LFD5 358 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 MPZL3Q6UWV2 235 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 SLC22A17Q8WUG5 538 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 LARP4BQ92615 738 aaKnown RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
PNKP-228ENST00000637325 RPGRIP1Q96KN7 1286 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 ZNF396Q96N95 335 aaPredicted RBP15.13■□□□□ 0.01
PNKP-228ENST00000637325 CLIC6Q96NY7 704 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 PARVGQ9HBI0 331 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 ANKFY1Q9P2R3 1169 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 CACNG4Q9UBN1 327 aa15.13■□□□□ 0.01
PNKP-228ENST00000637325 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.017e-7■■■■■ 86
PNKP-228ENST00000637325 PI4K2BG5E9Z4 385 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 LILRB3O75022 631 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 ADH1AP07327 375 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 PDIA4P13667 645 aaKnown RBP15.12■□□□□ 0.01
PNKP-228ENST00000637325 DSG1Q02413 1049 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 ITIH3Q06033 890 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 CBX2Q14781 532 aaPredicted RBP15.12■□□□□ 0.01
PNKP-228ENST00000637325 SLC39A14Q15043 492 aa15.12■□□□□ 0.01
PNKP-228ENST00000637325 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms