RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 TTC13Q8NBP0 860 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ING5Q8WYH8 240 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ACDQ96AP0 544 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 HEXIM2Q96MH2 286 aaKnown RBP3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 SPATA33Q96N06 139 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CCNL2Q96S94 520 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MMS19Q96T76 1030 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TMUB1Q9BVT8 246 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ADNPQ9H2P0 1102 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GSX1Q9H4S2 264 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 FAM124BQ9H5Z6 455 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 KANSL2Q9H9L4 492 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RGS18Q9NS28 235 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TM7SF3Q9NS93 570 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 C9orf78Q9NZ63 289 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 SUSD2Q9UGT4 822 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MCM3APO60318 1980 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 DENND4AQ7Z401 1863 aa3.56□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ABCA7Q8IZY2 2146 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PDS5AQ29RF7 1337 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 FANCIQ9NVI1 1328 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 A0A1W2PQD8 194 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ESYT2A0FGR8 921 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MYBPHLA2RUH7 354 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 N4BP3O15049 544 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TEX28O15482 410 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GRID2O43424 1007 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 C1RP00736 705 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 HNRNPA1P09651 372 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 C1SP09871 688 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 IFIT2P09913 472 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ZNF883P0CG24 379 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GLDCP23378 1020 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CTHP32929 405 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MRPS6P82932 125 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 G3BP1Q13283 466 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RASGRF1Q13972 1273 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 DMC1Q14565 340 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PTPRNQ16849 979 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 UVSSAQ2YD98 709 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 INAVAQ3KP66 663 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PABPC1LQ4VXU2 614 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PEAR1Q5VY43 1037 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ANO7Q6IWH7 933 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TXNDC11Q6PKC3 985 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 IL27RAQ6UWB1 636 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 SYT13Q7L8C5 426 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CLEC10AQ8IUN9 316 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TP53INP2Q8IXH6 220 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RGL4Q8IZJ4 473 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ARL14EPQ8N8R7 260 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ZSCAN1Q8NBB4 408 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RNF169Q8NCN4 708 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GALNT11Q8NCW6 608 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 NSUN7Q8NE18 718 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 BAHD1Q8TBE0 780 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TMC2Q8TDI7 906 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 USP33Q8TEY7 942 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ZNF384Q8TF68 577 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 NUDT8Q8WV74 236 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 DNAJB3Q8WWF6 145 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 DNAAF4Q8WXU2 420 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 NDRG1Q92597 394 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 EXOC4Q96A65 974 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 EMID1Q96A84 441 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CLUAP1Q96AJ1 413 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CENPTQ96BT3 561 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 HVCN1Q96D96 273 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 VCPIP1Q96JH7 1222 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CCDC17Q96LX7 622 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RPS6KC1Q96S38 1066 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TMEM209Q96SK2 561 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GAREM1Q9H706 876 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CHST12Q9NRB3 414 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CEP126Q9P2H0 1117 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 FTSJ1Q9UET6 329 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PCDHGB2Q9Y5G2 931 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TRPV2Q9Y5S1 764 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MRVI1Q9Y6F6 885 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ACANP16112 2415 aa3.55□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PKD1L1Q8TDX9 2849 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 FAM221AA4D161 298 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 WDR64B1ANS9 1081 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 B4E1Z4 1266 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 C9IYK1 514 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 GPR182O15218 404 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CCL16O15467 120 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 TGM5O43548 720 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RNF40O75150 1001 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RPS6KA5O75582 802 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RFPL3O75679 317 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 PAPLNO95428 1278 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 AKR1B1P15121 316 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 ITGB5P18084 799 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 CAPN3P20807 821 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 RBMS1P29558 406 aaKnown RBP3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 HOXC8P31273 242 aa3.54□□□□□ -1.84
SCARNA15.3-201ENST00000626315 MATKP42679 507 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms