RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 OR1G1P47890 313 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 NCKAP1LP55160 1127 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 RAD51AP2Q09MP3 1159 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 TUSC3Q13454 348 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 PPFIBP1Q86W92 1011 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 RNF168Q8IYW5 571 aaPredicted RBP24.53■■□□□ 1.52
SF1-220ENST00000626028 LINC00301Q8NCQ3 95 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 POP1Q99575 1024 aaKnown RBP24.53■■□□□ 1.52
SF1-220ENST00000626028 PARVGQ9HBI0 331 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 SNTG2Q9NY99 539 aa24.53■■□□□ 1.52
SF1-220ENST00000626028 PPP6R2O75170 966 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 TOM1L1O75674 476 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 YEATS4O95619 227 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 SOD2P04179 222 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 ZSCAN22P10073 491 aaPredicted RBP24.52■■□□□ 1.52
SF1-220ENST00000626028 GRM5P41594 1212 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 CEBPZQ03701 1054 aaKnown RBP24.52■■□□□ 1.52
SF1-220ENST00000626028 MCM6Q14566 821 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 ZNF568Q3ZCX4 644 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 CCDC73Q6ZRK6 1079 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 TMEM87AQ8NBN3 555 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 CASP10Q92851 521 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 CCDC94Q9BW85 323 aaPredicted RBP24.52■■□□□ 1.52
SF1-220ENST00000626028 VN1R3Q9BXE9 311 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 MARCH5Q9NX47 278 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 KLK14Q9P0G3 267 aa24.52■■□□□ 1.52
SF1-220ENST00000626028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 FAM13AO94988 1023 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 IL9P15248 144 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 YARSP54577 528 aaKnown RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 STK38Q15208 465 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 RRAGBQ5VZM2 374 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 MPZL3Q6UWV2 235 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 HAUS6Q7Z4H7 955 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 LRRC15Q8TF66 581 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 NECAB3Q96P71 396 aaPredicted RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 HERC2P3Q9BVR0 1158 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 TARS2Q9BW92 718 aaKnown RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 EMILIN2Q9BXX0 1053 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 CDT1Q9H211 546 aa24.51■■□□□ 1.51
SF1-220ENST00000626028 MRPL17Q9NRX2 175 aaKnown RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 BARX2Q9UMQ3 279 aaPredicted RBP24.51■■□□□ 1.51
SF1-220ENST00000626028 PTGESO14684 152 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 CLASP2O75122 1294 aaKnown RBP24.5■■□□□ 1.51
SF1-220ENST00000626028 TBCAO75347 108 aaKnown RBP24.5■■□□□ 1.51
SF1-220ENST00000626028 C1RP00736 705 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 KRT18P05783 430 aaKnown RBP24.5■■□□□ 1.51
SF1-220ENST00000626028 PTPN14Q15678 1187 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 TPRNQ4KMQ1 711 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 USP49Q70CQ1 688 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 ADHFE1Q8IWW8 467 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 VN1R2Q8NFZ6 395 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 CLIC6Q96NY7 704 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 TCHPQ9BT92 498 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 ADAM28Q9UKQ2 775 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 USP20Q9Y2K6 914 aa24.5■■□□□ 1.51
SF1-220ENST00000626028 PRG3Q9Y2Y8 225 aaPredicted RBP24.5■■□□□ 1.51
SF1-220ENST00000626028 NPHP3-ACAD11A0A0J9YXS1 232 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 ABLIM1O14639 778 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 SPTLC2O15270 562 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 LILRB3O75022 631 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 URODP06132 367 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 KYAT1Q16773 422 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 XKR4Q5GH76 650 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 ANKRD54Q6NXT1 300 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 MYCT1Q8N699 235 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 ST6GALNAC4Q9H4F1 302 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 DZANK1Q9NVP4 752 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 SEL1LQ9UBV2 794 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 GDAQ9Y2T3 454 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.49■■□□□ 1.51
SF1-220ENST00000626028 HCFC2Q9Y5Z7 792 aa24.49■■□□□ 1.51
SF1-220ENST00000626028 TRAK2O60296 914 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 SF3B1O75533 1304 aaKnown RBP eCLIP24.48■■□□□ 1.513e-8■■■■□ 20.2
SF1-220ENST00000626028 F13A1P00488 732 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 GLUD2P49448 558 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 DHX8Q14562 1220 aaKnown RBP24.48■■□□□ 1.51
SF1-220ENST00000626028 HSP90AA2PQ14568 343 aaPredicted RBP24.48■■□□□ 1.51
SF1-220ENST00000626028 NOLC1Q14978 699 aaKnown RBP eCLIP24.48■■□□□ 1.51
SF1-220ENST00000626028 NAB2Q15742 525 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 SPECC1Q5M775 1068 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 ALKAL1Q6UXT8 129 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 SV2BQ7L1I2 683 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 GJD3Q8N144 294 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 UROC1Q96N76 676 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 CHST7Q9NS84 486 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 SLC38A7Q9NVC3 462 aa24.48■■□□□ 1.51
SF1-220ENST00000626028 CLDN3O15551 220 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 PIGRP01833 764 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 CA8P35219 290 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 DSG1Q02413 1049 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 CACNB1Q02641 598 aaPredicted RBP24.47■■□□□ 1.51
SF1-220ENST00000626028 CREMQ03060 361 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 ZP2Q05996 745 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 ITIH3Q06033 890 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 MCL1Q07820 350 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 ELAVL2Q12926 359 aaKnown RBP24.47■■□□□ 1.51
SF1-220ENST00000626028 CLUL1Q15846 466 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 FUT10Q6P4F1 479 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 KCNG4Q8TDN1 519 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms