RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SGO2Q562F6 1265 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 LRRC74BQ6ZQY2 392 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 C4orf50Q6ZRC1 276 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 SLC13A5Q86YT5 568 aaPredicted RBP16.2■□□□□ 0.18
PMS1-221ENST00000624204 C4orf33Q8N1A6 199 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 VPS52Q8N1B4 723 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 NRG4Q8WWG1 115 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 HAS1Q92839 578 aa16.2■□□□□ 0.18
PMS1-221ENST00000624204 TRIM49P0CI25 452 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 TRIM49CP0CI26 452 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CHRNB2P17787 502 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 KRT15P19012 456 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 PTPN4P29074 926 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 RFC4P35249 363 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 ADCY8P40145 1251 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 ITGA8P53708 1063 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 SLC20A1Q8WUM9 679 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CCDC77Q9BR77 488 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 MAGEA13PA6NCF6 341 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 RPL13P26373 211 aaKnown RBP16.19■□□□□ 0.18
PMS1-221ENST00000624204 CPA2P48052 419 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CYP2J2P51589 502 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
PMS1-221ENST00000624204 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
PMS1-221ENST00000624204 STARD13Q9Y3M8 1113 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 USP17L5A8MUK1 530 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 EYA4O95677 639 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 MCL1Q07820 350 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 MDH1BQ5I0G3 518 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
PMS1-221ENST00000624204 RHOT2Q8IXI1 618 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
PMS1-221ENST00000624204 KDM3AQ9Y4C1 1321 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 MAP3K7O43318 606 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 EDIL3O43854 480 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
PMS1-221ENST00000624204 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
PMS1-221ENST00000624204 CMPK2Q5EBM0 449 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 ACSBG2Q5FVE4 666 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 NLRP9Q7RTR0 991 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 NINJ2Q9NZG7 142 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 RSPH10B2B2RC85 870 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 TBX10O75333 385 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 BAG2O95816 211 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 RSPH10BP0C881 870 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 CA4P22748 312 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 ARSHQ5FYA8 562 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 IFT43Q96FT9 208 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 MIPEPQ99797 713 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 HEMGNQ9BXL5 484 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 STK33Q9BYT3 514 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 ANAPC5Q9UJX4 755 aa16.18■□□□□ 0.18
PMS1-221ENST00000624204 GYG2O15488 501 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 ORC2Q13416 577 aaPredicted RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 SPARCL1Q14515 664 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 DAB2IPQ5VWQ8 1189 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 FAM186BQ8IYM0 893 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 EYA3Q99504 573 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 C12orf65Q9H3J6 166 aaKnown RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 DMAP1Q9NPF5 467 aaPredicted RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 RPS6KL1Q9Y6S9 549 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 REEP2Q9BRK0 252 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 CADM1Q9BY67 442 aaKnown RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 VCX3BQ9H321 246 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 VCX3AQ9NNX9 186 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 TRAF3IP3Q9Y228 551 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 A0A0G2JND7 137 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 ATF2P15336 505 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 HOXD13P35453 343 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 SNAP25P60880 206 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 PSMC6P62333 389 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 GIT2Q14161 759 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 PDCD7Q8N8D1 485 aaKnown RBP16.17■□□□□ 0.18
PMS1-221ENST00000624204 RHBDL2Q9NX52 303 aa16.17■□□□□ 0.18
PMS1-221ENST00000624204 MED24O75448 989 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 ALAS1P13196 640 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 SLC34A1Q06495 639 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 MOGSQ13724 837 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 KLF6Q99612 283 aaPredicted RBP16.16■□□□□ 0.18
PMS1-221ENST00000624204 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.16■□□□□ 0.18
PMS1-221ENST00000624204 EXOC1LA0A1B0GW35 172 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 ERVV-1B6SEH8 477 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 GOLGA8RI6L899 631 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 FOXN3O00409 490 aaPredicted RBP16.16■□□□□ 0.18
PMS1-221ENST00000624204 CALCAP01258 141 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 SNF8Q96H20 258 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
PMS1-221ENST00000624204 ADGRA3Q8IWK6 1321 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms