RNA–Protein interactions for RNA: ENST00000623604.2

AP005242.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP005242.3, Length 607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005242.3-201ENST00000623604 DEFB103AP81534 67 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 STK4Q13043 487 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 CAMK4Q16566 473 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 DCAF4L1Q3SXM0 396 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 UBXN11Q5T124 520 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 SLFN12LQ6IEE8 588 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 MPZL3Q6UWV2 235 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 EPM2AIP1Q7L775 607 aaPredicted RBP8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 MRPL10Q7Z7H8 261 aaKnown RBP8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 CDR2LQ86X02 465 aaPredicted RBP8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 ECHDC2Q86YB7 292 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 NPAS4Q8IUM7 802 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 HACE1Q8IYU2 909 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 SYCP3Q8IZU3 236 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 ZNF507Q8TCN5 953 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 HPS3Q969F9 1004 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 ZDHHC16Q969W1 377 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 PGBD4Q96DM1 585 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 TCHPQ9BT92 498 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 FGFBP2Q9BYJ0 223 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 TRIM6Q9C030 488 aaPredicted RBP8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 NUP62CLQ9H1M0 184 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 PDZD7Q9H5P4 517 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 PTPRHQ9HD43 1115 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 TMEM161AQ9NX61 479 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 PCDHB2Q9Y5E7 798 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 PTPRSQ13332 1948 aa8.4□□□□□ -1.06
AP005242.3-201ENST00000623604 ABLIM1O14639 778 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 CLDN3O15551 220 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 HOXA2O43364 376 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 GJB5O95377 273 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 MCF2P10911 925 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 IBSPP21815 317 aaPredicted RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 MATR3P43243 847 aaKnown RBP eCLIP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 BMT2Q1RMZ1 405 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ZNF568Q3ZCX4 644 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ZNF658Q5TYW1 1059 aaPredicted RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 EEF1DP3Q658K8 133 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 HERC6Q8IVU3 1022 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 KIAA0895Q8NCT3 520 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 SMG8Q8ND04 991 aaKnown RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 GLIS3Q8NEA6 775 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ERCC4Q92889 916 aaPredicted RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ZBTB45Q96K62 511 aaPredicted RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 EIF2AQ9BY44 585 aaKnown RBP8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 GBP3Q9H0R5 595 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 UBN1Q9NPG3 1134 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 KIAA1468Q9P260 1216 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ANKFY1Q9P2R3 1169 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 IPPQ9Y573 584 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 STYXL1Q9Y6J8 313 aa8.39□□□□□ -1.07
AP005242.3-201ENST00000623604 ANKRD63C9JTQ0 380 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 TLL1O43897 1013 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 DGKIO75912 1065 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 ITGA4P13612 1032 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 ATF7P17544 494 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 GARTP22102 1010 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 PPP1R2P41236 205 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 SNRPFP62306 86 aaKnown RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 HTRA4P83105 476 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 MCL1Q07820 350 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 NOLC1Q14978 699 aaKnown RBP eCLIP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 KYAT1Q16773 422 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 KNOP1Q1ED39 458 aaKnown RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 LRIT3Q3SXY7 679 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 COBLL1Q53SF7 1204 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 SLC39A4Q6P5W5 647 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 TMCO2Q7Z6W1 182 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 NELFCDQ8IXH7 590 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 THNSL1Q8IYQ7 743 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 GUF1Q8N442 669 aaKnown RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 RSPH1Q8WYR4 309 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 RAD9AQ99638 391 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 MSTO1Q9BUK6 570 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 CDT1Q9H211 546 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 MSRAQ9UJ68 235 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 MAN1B1Q9UKM7 699 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 GDAQ9Y2T3 454 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 GIT1Q9Y2X7 761 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 INSL6Q9Y581 213 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 PCDHA11Q9Y5I1 949 aa8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
AP005242.3-201ENST00000623604 CITO14578 2027 aa8.37□□□□□ -1.07
AP005242.3-201ENST00000623604 ZMYM2Q9UBW7 1377 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms