RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 SFTPCP11686 197 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 JUPP14923 745 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 ZSCAN20P17040 1043 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-204ENST00000623364 HOXB4P17483 251 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-204ENST00000623364 CTHP32929 405 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 SLC11A1P49279 550 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 GLUD2P49448 558 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 DSC3Q14574 896 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 IGFBP7Q16270 282 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 LYSMD4Q5XG99 296 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 TXNDC11Q6PKC3 985 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 ERICH1Q86X53 443 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 LCORLQ8N3X6 602 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 SYTL5Q8TDW5 730 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-204ENST00000623364 NAF1Q96HR8 494 aaKnown RBP7.44□□□□□ -1.22
CDKL5-204ENST00000623364 NRDE2Q9H7Z3 1164 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 CAPN10Q9HC96 672 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 CHST12Q9NRB3 414 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 PILRBQ9UKJ0 227 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 PCDHB8Q9UN66 801 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 FPGT-TNNI3KV9GXZ4 949 aa7.44□□□□□ -1.22
CDKL5-204ENST00000623364 ATXN2Q99700 1313 aaKnown RBP7.44□□□□□ -1.22
CDKL5-204ENST00000623364 APAF1O14727 1248 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 GJB3O75712 270 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 UBTFL1P0CB47 393 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-204ENST00000623364 MYCLP12524 364 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-204ENST00000623364 FCARP24071 287 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 HOXA9P31269 272 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 PTGER3P43115 390 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 GRM4Q14833 912 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 CCDC96Q2M329 555 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 TBC1D25Q3MII6 688 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 CCDC157Q569K6 752 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 FAM78AQ5JUQ0 283 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 LILRA6Q6PI73 481 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 METTL7BQ6UX53 244 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 VITQ6UXI7 678 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 YAF2Q8IY57 180 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-204ENST00000623364 ZBTB10Q96DT7 871 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 CLSTN3Q9BQT9 956 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 HERC2P3Q9BVR0 1158 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 GBP3Q9H0R5 595 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
CDKL5-204ENST00000623364 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ARNTLO00327 626 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PRKAB2O43741 272 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 BRINP1O60477 761 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 AGFG2O95081 481 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 SKIP12755 728 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ITPKAP23677 461 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 MARK3P27448 753 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ADRA1BP35368 520 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 SLC16A2P36021 539 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PCBP4P57723 403 aaKnown RBP7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PTH1RQ03431 593 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 NEDD9Q14511 834 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 NBR1Q14596 966 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 SPDYCQ5MJ68 293 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 SLC9C2Q5TAH2 1124 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-204ENST00000623364 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-204ENST00000623364 DHRS13Q6UX07 377 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 GLYCTKQ8IVS8 523 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 TMEM40Q8WWA1 233 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ARMT1Q9H993 441 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PXMP2Q9NR77 195 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDKL5-204ENST00000623364 TBC1D13Q9NVG8 400 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 POLR3BQ9NW08 1133 aaPredicted RBP7.42□□□□□ -1.22
CDKL5-204ENST00000623364 ERAP1Q9NZ08 941 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 COL20A1Q9P218 1284 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 DNAJB4Q9UDY4 337 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 HDAC5Q9UQL6 1122 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 WDR19Q8NEZ3 1342 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 PCDH15Q96QU1 1955 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 NOTCH4Q99466 2003 aa7.42□□□□□ -1.22
CDKL5-204ENST00000623364 VWA8A3KMH1 1905 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 SMIM35A0A1B0GVV1 85 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 ANO9A1A5B4 782 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 B4E1Z4 1266 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 ALDH2P05091 517 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 POU2F2P09086 479 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 HSPD1P10809 573 aaKnown RBP7.41□□□□□ -1.22
CDKL5-204ENST00000623364 VASPP50552 380 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-204ENST00000623364 INHBCP55103 352 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 CREMQ03060 361 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 GRSF1Q12849 480 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDKL5-204ENST00000623364 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
CDKL5-204ENST00000623364 NCAPHQ15003 741 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 GLB1LQ6UWU2 654 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 CYFIP1Q7L576 1253 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 SYT13Q7L8C5 426 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 MCF2L2Q86YR7 1114 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 TSTD1Q8NFU3 115 aa7.41□□□□□ -1.22
CDKL5-204ENST00000623364 TNPO1Q92973 898 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms