RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 POTEMA6NI47 508 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 USO1O60763 962 aaKnown RBP12.16□□□□□ -0.46
LINC00963-214ENST00000622680 CDKL5O76039 1030 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 ARL2P36404 184 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 ID4P47928 161 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 NTHL1P78549 312 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 GRIK3Q13003 919 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 SLC27A1Q6PCB7 646 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 PIGOQ8TEQ8 1089 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 NAP1L4Q99733 375 aaKnown RBP12.16□□□□□ -0.46
LINC00963-214ENST00000622680 COLEC11Q9BWP8 271 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 PRKD2Q9BZL6 878 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 FOXQ1Q9C009 403 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 CXCL16Q9H2A7 254 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 PLEKHA4Q9H4M7 779 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
LINC00963-214ENST00000622680 PARP2Q9UGN5 583 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 GIT1Q9Y2X7 761 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 NUMBLQ9Y6R0 609 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 EML5Q05BV3 1969 aa12.16□□□□□ -0.46
LINC00963-214ENST00000622680 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 PFKFB2O60825 505 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 LRRN2O75325 713 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 NR1I2O75469 434 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 DGAT1O75907 488 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 KIF4AO95239 1232 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 LARGE1O95461 756 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 LAMP2P13473 410 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 XBP1P17861 261 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 KRT2P35908 639 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 RARRES1P49788 294 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 HSP90AA2PQ14568 343 aaPredicted RBP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 CALCRLQ16602 461 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 LILRA6Q6PI73 481 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 CYP26C1Q6V0L0 522 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 MAEAQ7L5Y9 396 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 HACE1Q8IYU2 909 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 FGF14Q92915 247 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 RPP25Q9BUL9 199 aaKnown RBP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00963-214ENST00000622680 ZDHHC7Q9NXF8 308 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 FNIP2Q9P278 1114 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 FBXW11Q9UKB1 542 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 ZMYM2Q9UBW7 1377 aa12.15□□□□□ -0.46
LINC00963-214ENST00000622680 MYO16Q9Y6X6 1858 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 SF3B1O75533 1304 aaKnown RBP eCLIP12.14□□□□□ -0.478e-6■■■■■ 107
LINC00963-214ENST00000622680 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 PTGESO14684 152 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 ADAM12O43184 909 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 ZMYND10O75800 440 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 LYPLA2O95372 231 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 PAPLNO95428 1278 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 EDN1P05305 212 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 FDPSP14324 419 aaKnown RBP12.14□□□□□ -0.47
LINC00963-214ENST00000622680 GLULP15104 373 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 TXKP42681 527 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
LINC00963-214ENST00000622680 PSMD5Q16401 504 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 GRASPQ7Z6J2 395 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-214ENST00000622680 CEP57Q86XR8 500 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 HDAC7Q8WUI4 952 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 HSD17B14Q9BPX1 270 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 NFKBIZQ9BYH8 718 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
LINC00963-214ENST00000622680 ANKEF1Q9NU02 776 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 PCDHA12Q9UN75 941 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 USP20Q9Y2K6 914 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
LINC00963-214ENST00000622680 GREB1Q4ZG55 1949 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 ACACBO00763 2458 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 A0A1B0GUA9 196 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 CCL16O15467 120 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 EPB41L2O43491 1005 aaKnown RBP12.13□□□□□ -0.47
LINC00963-214ENST00000622680 NEMFO60524 1076 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 TADA2AO75478 443 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 RECQL4O94761 1208 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 FSHRP23945 695 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 FOXK2Q01167 660 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 TUSC3Q13454 348 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 FAM171A1Q5VUB5 890 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
LINC00963-214ENST00000622680 PARM1Q6UWI2 310 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms