RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ITGB5P18084 799 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 COPB2P35606 906 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 IFT88Q13099 833 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 HACE1Q8IYU2 909 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 SH2D3CQ8N5H7 860 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 IL31RAQ8NI17 732 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 TLR10Q9BXR5 811 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 SLC38A10Q9HBR0 1119 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 DBR1Q9UK59 544 aaKnown RBP14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 DUOX1Q9NRD9 1551 aa14.08□□□□□ -0.15
PPP4R3B-206ENST00000616407 FAM187AA6NFU0 413 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 KIAA0391O15091 583 aaKnown RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 HYIQ5T013 277 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 HVCN1Q96D96 273 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 AP5M1Q9H0R1 490 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 SPON1Q9HCB6 807 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 KRT14P02533 472 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 CDO1Q16878 200 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 WDR72Q3MJ13 1102 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 CDR2LQ86X02 465 aaPredicted RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 BAP1Q92560 729 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 KCTD10Q9H3F6 313 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 TOPORSQ9NS56 1045 aaPredicted RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 PCDHB2Q9Y5E7 798 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 DOT1LQ8TEK3 1739 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 EXTL3O43909 919 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 CALB1P05937 261 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 PHBP35232 272 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 CLK2P49760 499 aaKnown RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 RHOT1Q8IXI2 618 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 TTC16Q8NEE8 873 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 TAS1R2Q8TE23 839 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 NGRNQ9NPE2 291 aaKnown RBP14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 CASZ1Q86V15 1759 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 SNED1Q8TER0 1413 aa14.08□□□□□ -0.16
PPP4R3B-206ENST00000616407 DSG3P32926 999 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TRIM72Q6ZMU5 477 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 SLC20A1Q8WUM9 679 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 RUBCNQ92622 972 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 IKZF4Q9H2S9 585 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 CAPN7Q9Y6W3 813 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 NUP98P52948 1817 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 PMS2P54278 862 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 MAGOHP61326 146 aaKnown RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 CBWD6Q4V339 395 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 CBWD3Q5JTY5 395 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 CBWD5Q5RIA9 395 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 KCNV1Q6PIU1 500 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 RBBP8NLQ8NC74 664 aaPredicted RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 PCSK1NQ9UHG2 260 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 USP20Q9Y2K6 914 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 BAZ2AQ9UIF9 1905 aaKnown RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 XPOTO43592 962 aaKnown RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TJP3O95049 919 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 SUPT20HL2P0C7V6 817 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 DHX34Q14147 1143 aaKnown RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 PPP2R5DQ14738 602 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 VSIG1Q86XK7 387 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 OR6B3Q8NGW1 331 aa14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TTC7AQ9ULT0 858 aaPredicted RBP14.07□□□□□ -0.16
PPP4R3B-206ENST00000616407 TBC1D12O60347 775 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 BASP1P80723 227 aaKnown RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ITIH3Q06033 890 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MXD4Q14582 209 aaPredicted RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MEI1Q5TIA1 1274 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 NIPA1Q7RTP0 329 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 GIMAP7Q8NHV1 300 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ELMO3Q96BJ8 720 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 RBM41Q96IZ5 413 aaKnown RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 VAV3Q9UKW4 847 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ASTN1O14525 1302 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 A6NJR5 290 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 ASB14A6NK59 587 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 DDX3XO00571 662 aaKnown RBP eCLIP14.06□□□□□ -0.162e-8■■■□□ 15.4
PPP4R3B-206ENST00000616407 MCF2LO15068 1137 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MMEP08473 750 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MYBL1P10243 752 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 RFC5P40937 340 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 PSMC1P62191 440 aaKnown RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 NOP14P78316 857 aaKnown RBP14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MXRA7P84157 204 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 MYBPC2Q14324 1141 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 C2CD6Q53TS8 623 aa14.06□□□□□ -0.16
PPP4R3B-206ENST00000616407 C6orf118Q5T5N4 469 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms