RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TPRG1Q6ZUI0 275 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 KXD1Q9BQD3 176 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 IFT122Q9HBG6 1241 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■■□□□ 13.8
TRAPPC3-209ENST00000616395 RAB23Q9ULC3 237 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 STBD1O95210 358 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 RPS9P46781 194 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 DSC1Q08554 894 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 MTAPQ13126 283 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 LAIR1Q6GTX8 287 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 NELL2Q99435 816 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 FAM126AQ9BYI3 521 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 GPR62Q9BZJ7 368 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 UNC45AQ9H3U1 944 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 FNIP2Q9P278 1114 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 WDR81Q562E7 1941 aa19.56■□□□□ 0.72
TRAPPC3-209ENST00000616395 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 NCAM2O15394 837 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 IFNAR1P17181 557 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 HOXA11P31270 313 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 SFNP31947 248 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 CIITAP33076 1130 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 JAK3P52333 1124 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 DMWDQ09019 674 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 FZD5Q13467 585 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 XKR3Q5GH77 459 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 TRIM22Q8IYM9 498 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 ITFG1Q8TB96 612 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 MBOAT7Q96N66 472 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 PHF20Q9BVI0 1012 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 ANGPTL2Q9UKU9 493 aa19.55■□□□□ 0.72
TRAPPC3-209ENST00000616395 ARL5CA6NH57 179 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MSH4O15457 936 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 PRPF3O43395 683 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 GAS7O60861 476 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MAFO75444 373 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 TDGF1P13385 188 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 ITGA4P13612 1032 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MLH1P40692 756 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 SMG8Q8ND04 991 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 GJA10Q969M2 543 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 GAD1Q99259 594 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 COLEC11Q9BWP8 271 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MINDY3Q9H8M7 445 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 UBN1Q9NPG3 1134 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MIOSQ9NXC5 875 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 VPS54Q9P1Q0 977 aa19.54■□□□□ 0.72
TRAPPC3-209ENST00000616395 MTCL1Q9Y4B5 1905 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 RETP07949 1114 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 SCNN1GP51170 649 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 AKAP17AQ02040 695 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 TRIM29Q14134 588 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 USP41Q3LFD5 358 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 FUT10Q6P4F1 479 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 ZNF852Q6ZMS4 543 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 GPR65Q8IYL9 337 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 CELF5Q8N6W0 485 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 ZFP42Q96MM3 310 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 AIFM3Q96NN9 605 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 RIT2Q99578 217 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 RNF26Q9BY78 433 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 ZSCAN16Q9H4T2 348 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 SEMA4GQ9NTN9 838 aa19.53■□□□□ 0.72
TRAPPC3-209ENST00000616395 SHISA7A6NL88 538 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 GDF9O60383 454 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 LRP3O75074 770 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 NR1I2O75469 434 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 F13A1P00488 732 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 HNRNPA1P09651 372 aaKnown RBP eCLIP19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 NRLP54845 237 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 ADCY1Q08828 1119 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 LRCH2Q5VUJ6 765 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 PRSS55Q6UWB4 352 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 PRR23BQ6ZRT6 265 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 CNNM3Q8NE01 707 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 SLC5A5Q92911 643 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 TEKT3Q9BXF9 490 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 ZMYND12Q9H0C1 365 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 FBXW11Q9UKB1 542 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 IPPQ9Y573 584 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 COL4A3BPQ9Y5P4 624 aa19.52■□□□□ 0.72
TRAPPC3-209ENST00000616395 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 CCL16O15467 120 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 EDIL3O43854 480 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 PMLP29590 882 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 CREMQ03060 361 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 PPM1LQ5SGD2 360 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 LIN9Q5TKA1 542 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 MIER3Q7Z3K6 550 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 NPAS3Q8IXF0 933 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 RABGGTAQ92696 567 aa19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 EIF2AQ9BY44 585 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-209ENST00000616395 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms