RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MGAT1P26572 445 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 TUBA3CQ13748 450 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 SEPT2Q15019 361 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 BMT2Q1RMZ1 405 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 RABL3Q5HYI8 236 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 TUBA3EQ6PEY2 450 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 Q8N1X5 172 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 REPS2Q8NFH8 660 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 CASKIN2Q8WXE0 1202 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 CYFIP2Q96F07 1278 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 ASPSCR1Q9BZE9 553 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 CSRNP2Q9H175 543 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 MOCS1Q9NZB8 636 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 SAP30BPQ9UHR5 308 aaKnown RBP6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 DNM3Q9UQ16 869 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 ATRNL1Q5VV63 1379 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 XPOTO43592 962 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA12O60330 932 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 FZD7O75084 574 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 NDUFS2O75306 463 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 SNRPA1P09661 255 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC16A1P53985 500 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 DGCR2P98153 550 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 ACAP2Q15057 778 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 LSM12Q3MHD2 195 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 ANKS6Q68DC2 871 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 ZFP28Q8NHY6 868 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 MANSC1Q9H8J5 431 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 TUBD1Q9UJT1 453 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA9Q9Y5G4 932 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA8Q9Y5G5 932 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA7Q9Y5G6 932 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA6Q9Y5G7 932 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 PCDHGA3Q9Y5H0 932 aa6.75□□□□□ -1.33
SCAMP1-205ENST00000614488 CXorf49A8MYA2 514 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 TEX33O43247 280 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 RECQL4O94761 1208 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 NCLP19338 710 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 C5AR1P21730 350 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC6A9P48067 706 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 CLRN1P58418 232 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC25A3Q00325 362 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 PCBP2Q15366 365 aaKnown RBP eCLIP6.74□□□□□ -1.333e-6■■■■■ 29.1
SCAMP1-205ENST00000614488 EFCAB12Q6NXP0 572 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 OR10H5Q8NGA6 315 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 OR2I1PQ8NGU4 316 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 NRG4Q8WWG1 115 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 TEKT5Q96M29 485 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 C7orf25Q9BPX7 421 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 SPON1Q9HCB6 807 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 TYW1Q9NV66 732 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 TNKSO95271 1327 aa6.74□□□□□ -1.33
SCAMP1-205ENST00000614488 hCG_2014768A0A024R1R8 64 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 DIRC3C9JPN6 131 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 ZNF202O95125 648 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 CSRP2Q16527 193 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 PTPN21Q16825 1174 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 RRP12Q5JTH9 1297 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 USP51Q70EK9 711 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 PNMA8AQ86V59 439 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 PPM1NQ8N819 430 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC35B2Q8TB61 432 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 DCLRE1CQ96SD1 692 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 SORCS3Q9UPU3 1222 aa6.73□□□□□ -1.33
SCAMP1-205ENST00000614488 NPIPB8E9PQR5 432 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 ANAPC15P60006 121 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 AFMIDQ63HM1 303 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 OTUD7BQ6GQQ9 843 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 MIGA2Q7L4E1 593 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 ZNF483Q8TF39 744 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 SMAD5Q99717 465 aaKnown RBP6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 EIF2B4Q9UI10 523 aaKnown RBP6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 AJAP1Q9UKB5 411 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 SHROOM4Q9ULL8 1493 aa6.72□□□□□ -1.33
SCAMP1-205ENST00000614488 NARSO43776 548 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 FAM20BO75063 409 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 PPFIA4O75335 1185 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 GPR32O75388 356 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 APOBEC3AP31941 199 aaPredicted RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 PTGS2P35354 604 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 ACVRL1P37023 503 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 GDF5P43026 501 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 ABHD18Q0P651 414 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 ATXN7L2Q5T6C5 722 aaPredicted RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 FNDC7Q5VTL7 733 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 EFCAB2Q5VUJ9 269 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 ZNF276Q8N554 614 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 FBXO18Q8NFZ0 1043 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms