RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 CREG2Q8IUH2 290 aa12.35□□□□□ -0.43
LINC01278-204ENST00000609143 NOA1Q8NC60 698 aaKnown RBP12.35□□□□□ -0.43
LINC01278-204ENST00000609143 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
LINC01278-204ENST00000609143 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
LINC01278-204ENST00000609143 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
LINC01278-204ENST00000609143 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
LINC01278-204ENST00000609143 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
LINC01278-204ENST00000609143 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
LINC01278-204ENST00000609143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.437e-6■■■■■ 74.5
LINC01278-204ENST00000609143 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 MSCO60682 206 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 TOM1L1O75674 476 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 FTCDO95954 541 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 LGALS2P05162 132 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PRKCBP05771 671 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PAFAH1B1P43034 410 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 GCNT1Q02742 428 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PRPF4BQ13523 1007 aaKnown RBP12.34□□□□□ -0.43
LINC01278-204ENST00000609143 BRD3Q15059 726 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 ZACNQ401N2 412 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
LINC01278-204ENST00000609143 RHPN2Q8IUC4 686 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 COG1Q8WTW3 980 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 TRAPPC12Q8WVT3 735 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PTPN18Q99952 460 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 TCHPQ9BT92 498 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 RNF14Q9UBS8 474 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 NCANO14594 1321 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 CCDC151A5D8V7 595 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 TMCO5BA8MYB1 307 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 ASAP2O43150 1006 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 EDN1P05305 212 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 HARSP12081 509 aaKnown RBP12.34□□□□□ -0.43
LINC01278-204ENST00000609143 ITIH3Q06033 890 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 BIRC3Q13489 604 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 GJC2Q5T442 439 aaPredicted RBP12.34□□□□□ -0.43
LINC01278-204ENST00000609143 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
LINC01278-204ENST00000609143 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 SLC20A1Q8WUM9 679 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 TAF4BQ92750 862 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PSMB7Q99436 277 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
LINC01278-204ENST00000609143 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 ADCYAP1R1P41586 468 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 EFCAB12Q6NXP0 572 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 TPCN2Q8NHX9 752 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 MAML3Q96JK9 1138 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 KATNBL1Q9H079 304 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 SLC5A4Q9NY91 659 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 RAB21Q9UL25 225 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 CYP26A1O43174 497 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 CXCR5P32302 372 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 HUNKP57058 714 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 CCDC70Q6NSX1 233 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 AFG1LQ8WV93 481 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
LINC01278-204ENST00000609143 NOCTQ9UK39 431 aaKnown RBP12.33□□□□□ -0.44
LINC01278-204ENST00000609143 SLC15A5A6NIM6 579 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 MAGEB2O15479 319 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 ERLIN1O75477 346 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 SGPL1O95470 568 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 C22orf31O95567 290 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
LINC01278-204ENST00000609143 INSRRP14616 1297 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 ABCB4P21439 1286 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 PDE6CP51160 858 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 CLCN3P51790 818 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 RPS6KA1Q15418 735 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 ZBTB41Q5SVQ8 909 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
LINC01278-204ENST00000609143 BRSK2Q8IWQ3 736 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 TATDN2Q93075 761 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 TINF2Q9BSI4 451 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 ABHD16BQ9H3Z7 469 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 COL1A2P08123 1366 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 OGTO15294 1046 aa12.32□□□□□ -0.44
LINC01278-204ENST00000609143 PPFIA4O75335 1185 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms