RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 EDN1P05305 212 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 KRT18P05783 430 aaKnown RBP26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 GTF2F1P35269 517 aaKnown RBP eCLIP26.04■■□□□ 1.762e-6■■■□□ 17.3
SSX2IP-209ENST00000603677 OR1G1P47890 313 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 YARSP54577 528 aaKnown RBP26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 CEBPZQ03701 1054 aaKnown RBP26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 MCM6Q14566 821 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 EEF1DP3Q658K8 133 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 SV2BQ7L1I2 683 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 TMEM173Q86WV6 379 aaPredicted RBP26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 RNF168Q8IYW5 571 aaPredicted RBP26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 TMEM87AQ8NBN3 555 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 KCNG4Q8TDN1 519 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 ST6GALNAC4Q9H4F1 302 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 SEL1LQ9UBV2 794 aa26.04■■□□□ 1.76
SSX2IP-209ENST00000603677 HIDE1A8MVS5 230 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 B4GALT3O60512 393 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 TBCAO75347 108 aaKnown RBP26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 RAD51AP2Q09MP3 1159 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 SMAD2Q15796 467 aaKnown RBP26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 ZNF568Q3ZCX4 644 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 HAUS6Q7Z4H7 955 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 FAM178BQ8IXR5 827 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 MYCT1Q8N699 235 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 SMRP1Q8NCR6 262 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 UROC1Q96N76 676 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 POP1Q99575 1024 aaKnown RBP26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 TCHPQ9BT92 498 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 EMILIN2Q9BXX0 1053 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 LRRC27Q9C0I9 530 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 CDT1Q9H211 546 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 CUEDC2Q9H467 287 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 MRPL17Q9NRX2 175 aaKnown RBP26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 CLEC1BQ9P126 229 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 BDP1A6H8Y1 2624 aa26.03■■□□□ 1.76
SSX2IP-209ENST00000603677 MBTPS2O43462 519 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 TRAK2O60296 914 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 XKR4Q5GH76 650 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 USP49Q70CQ1 688 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 CLIC6Q96NY7 704 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 HERC2P3Q9BVR0 1158 aa26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 TARS2Q9BW92 718 aaKnown RBP26.02■■□□□ 1.76
SSX2IP-209ENST00000603677 PER2O15055 1255 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 LINC01565O15544 149 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 CUTAO60888 179 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 GLP2RO95838 553 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 PIGRP01833 764 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 CREMQ03060 361 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 DLX2Q07687 328 aaPredicted RBP26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 ELAVL2Q12926 359 aaKnown RBP26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 TPRNQ4KMQ1 711 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 LRRC15Q8TF66 581 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 BCL7CQ8WUZ0 217 aaPredicted RBP26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 ACAP3Q96P50 834 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 TSPAN18Q96SJ8 248 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 SLC38A7Q9NVC3 462 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 MARCH5Q9NX47 278 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 KLK14Q9P0G3 267 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 DPP7Q9UHL4 492 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 PCDHGC5Q9Y5F6 944 aa26.01■■□□□ 1.75
SSX2IP-209ENST00000603677 ABLIM1O14639 778 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 PTGESO14684 152 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 CLDN3O15551 220 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 CSPG5O95196 566 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 URODP06132 367 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 GAP43P17677 238 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 GTF2BQ00403 316 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 MCL1Q07820 350 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 DHX8Q14562 1220 aaKnown RBP26■■□□□ 1.75
SSX2IP-209ENST00000603677 PTPN14Q15678 1187 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 SPECC1Q5M775 1068 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 ALKAL1Q6UXT8 129 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 HVCN1Q96D96 273 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 CHST7Q9NS84 486 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 DZANK1Q9NVP4 752 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 ADAM28Q9UKQ2 775 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 MUC3AQ02505 3323 aa26■■□□□ 1.75
SSX2IP-209ENST00000603677 NPHP3-ACAD11A0A0J9YXS1 232 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 LILRB3O75022 631 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 CLASP2O75122 1294 aaKnown RBP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 STAT6P42226 847 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 HSP90AA2PQ14568 343 aaPredicted RBP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 NOLC1Q14978 699 aaKnown RBP eCLIP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 NAB2Q15742 525 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 USP41Q3LFD5 358 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 PYM1Q9BRP8 204 aaKnown RBP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 VN1R3Q9BXE9 311 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 PLEKHA5Q9HAU0 1116 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 TBX20Q9UMR3 447 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 GDAQ9Y2T3 454 aa25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 PRG3Q9Y2Y8 225 aaPredicted RBP25.99■■□□□ 1.75
SSX2IP-209ENST00000603677 SF3B1O75533 1304 aaKnown RBP eCLIP25.98■■□□□ 1.752e-6■■■■■ 41.7
SSX2IP-209ENST00000603677 TMEM189-UBE2V1I3L0A0 370 aa25.98■■□□□ 1.75
SSX2IP-209ENST00000603677 IL9P15248 144 aa25.98■■□□□ 1.75
SSX2IP-209ENST00000603677 KCNE1P15382 129 aa25.98■■□□□ 1.75
SSX2IP-209ENST00000603677 DSG1Q02413 1049 aa25.98■■□□□ 1.75
SSX2IP-209ENST00000603677 ITIH3Q06033 890 aa25.98■■□□□ 1.75
SSX2IP-209ENST00000603677 ANKRD54Q6NXT1 300 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms