RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ITIH3Q06033 890 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 MAPK7Q13164 816 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 TUSC3Q13454 348 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
IRF3-224ENST00000599680 TMEM31Q5JXX7 168 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 ELMSAN1Q6PJG2 1045 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 GPBP1Q86WP2 473 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 CCDC94Q9BW85 323 aaPredicted RBP15.74■□□□□ 0.11
IRF3-224ENST00000599680 PHF7Q9BWX1 381 aaPredicted RBP15.74■□□□□ 0.11
IRF3-224ENST00000599680 ARHGAP28Q9P2N2 729 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 ADAM28Q9UKQ2 775 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 TNFSF13BQ9Y275 285 aa15.74■□□□□ 0.11
IRF3-224ENST00000599680 VWA8A3KMH1 1905 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 H0YCG3 227 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 DCXO43602 365 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 EPCAMP16422 314 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 MATR3P43243 847 aaKnown RBP eCLIP15.73■□□□□ 0.11
IRF3-224ENST00000599680 SLC12A3P55017 1021 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 RESTQ13127 1097 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 RARS2Q5T160 578 aaKnown RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 FUT10Q6P4F1 479 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 SYCE2Q6PIF2 218 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 GSTCDQ8NEC7 633 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 RPGRIP1Q96KN7 1286 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 RIPOR3Q96MK2 946 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 KLHL5Q96PQ7 755 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 ACO2Q99798 780 aaKnown RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 S1PR5Q9H228 398 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 TOPORSQ9NS56 1045 aaPredicted RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 LARSQ9P2J5 1176 aaKnown RBP15.73■□□□□ 0.11
IRF3-224ENST00000599680 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 CLIC4Q9Y696 253 aa15.73■□□□□ 0.11
IRF3-224ENST00000599680 SF3B1O75533 1304 aaKnown RBP eCLIP15.72■□□□□ 0.119e-7■■■■■ 57.4
IRF3-224ENST00000599680 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 CASTOR2A6NHX0 329 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 F8W810 466 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 FAM13AO94988 1023 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 ADH1AP07327 375 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 CNPP09543 421 aaKnown RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 PLCG1P19174 1290 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 TXLNAP40222 546 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 MTHFRP42898 656 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 OSTNP61366 133 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 KARSQ15046 597 aaKnown RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 USP41Q3LFD5 358 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 TAS1R1Q7RTX1 841 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 ZBTB33Q86T24 672 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 RNF135Q8IUD6 432 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 SUSD6Q92537 303 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 RABGGTAQ92696 567 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 NECTIN4Q96NY8 510 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 TARS2Q9BW92 718 aaKnown RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 CDT1Q9H211 546 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 ZSCAN16Q9H4T2 348 aaPredicted RBP15.72■□□□□ 0.11
IRF3-224ENST00000599680 CCDC39Q9UFE4 941 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 ODF2LQ9ULJ1 636 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 NR2E1Q9Y466 385 aa15.72■□□□□ 0.11
IRF3-224ENST00000599680 FAM86C2PA6NEL3 165 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 PTGESO14684 152 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 STX6O43752 255 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 MCF2P10911 925 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 MARCKSP29966 332 aaPredicted RBP15.71■□□□□ 0.11
IRF3-224ENST00000599680 CLCN4P51793 760 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 CREMQ03060 361 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 GRIN1Q05586 938 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 MPZL3Q6UWV2 235 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 TAS1R3Q7RTX0 852 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 SLC22A17Q8WUG5 538 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.11
IRF3-224ENST00000599680 RAD54LQ92698 747 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 BICD1Q96G01 975 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 FBXL18Q96ME1 805 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 REEP2Q9BRK0 252 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
IRF3-224ENST00000599680 ADAM7Q9H2U9 754 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 ANKFY1Q9P2R3 1169 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 DPP7Q9UHL4 492 aa15.71■□□□□ 0.11
IRF3-224ENST00000599680 LOC730098B7Z3J9 87 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 GPR37L1O60883 481 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 TBCAO75347 108 aaKnown RBP15.7■□□□□ 0.1
IRF3-224ENST00000599680 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
IRF3-224ENST00000599680 COL9A1P20849 921 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 SP100P23497 879 aaPredicted RBP15.7■□□□□ 0.1
IRF3-224ENST00000599680 GRM5P41594 1212 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 DSG1Q02413 1049 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 MCM6Q14566 821 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 GLRA4Q5JXX5 417 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 ATAT1Q5SQI0 421 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 MYCT1Q8N699 235 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 C12orf76Q8N812 135 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms