RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 DBR1Q9UK59 544 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TDP2O95551 362 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 GFAPP14136 432 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 LTKP29376 864 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ZNF473Q8WTR7 871 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 CEP95Q96GE4 821 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 AGAP3Q96P47 875 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 RBAKQ9NYW8 714 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 PCDHGB4Q9UN71 923 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 DPYSL4O14531 572 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 AKAP10O43572 662 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 SKOR1P84550 965 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ZNF555Q8NEP9 628 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 GRAMD1AQ96CP6 724 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 HEG1Q9ULI3 1381 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 H0Y626 953 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TRIM16O95361 564 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 PKD2L2Q9NZM6 624 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ATP10AO60312 1499 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 MYO1GB0I1T2 1018 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 INPP5AQ14642 412 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 INPP5DQ92835 1189 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 EFCAB14O75071 495 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 COPB2P35606 906 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 NNMTP40261 264 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 QARSP47897 775 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ZNF235Q14590 738 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 P3H1Q32P28 736 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 PLD3Q8IV08 490 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
SCN8A-208ENST00000599343 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
SCN8A-208ENST00000599343 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GGPS1O95749 300 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ASNSP08243 561 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GIMAP8Q8ND71 665 aaPredicted RBP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 EIF2AK1Q9BQI3 630 aaKnown RBP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ARL2BPQ9Y2Y0 163 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ZHX2Q9Y6X8 837 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SERPIND1P05546 499 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GNAT1P11488 350 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SERPINB10P48595 397 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SULT1E1P49888 294 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 KRT76Q01546 638 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 HLFQ16534 295 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SPDYE7PQ495Y7 208 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 C4orf33Q8N1A6 199 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SLC30A5Q8TAD4 765 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 URGCPQ8TCY9 931 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 TMEM161AQ9NX61 479 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 HMOX2P30519 316 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 STAT4Q14765 748 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 KIZQ2M2Z5 673 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GALNT4Q8N4A0 578 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 STAMBPL1Q96FJ0 436 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 FAM20AQ96MK3 541 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 EPN3Q9H201 632 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN8A-208ENST00000599343 KRT8P05787 483 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 ACTR2P61160 394 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 MAP3K10Q02779 954 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 GRM4Q14833 912 aa12.48□□□□□ -0.41
SCN8A-208ENST00000599343 SLC9A5Q14940 896 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms