RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CREMQ03060 361 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 RTP2Q5QGT7 225 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 SLC27A1Q6PCB7 646 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 DCLRE1AQ6PJP8 1040 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 PRSS55Q6UWB4 352 aaPredicted RBP11.07□□□□□ -0.64
LIG1-209ENST00000596104 C1orf210Q8IVY1 113 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 PJA1Q8NG27 643 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 KCNG4Q8TDN1 519 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 PIK3R5Q8WYR1 880 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 FGF14Q92915 247 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 TNFRSF25Q93038 417 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 CLSTN3Q9BQT9 956 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 FOXQ1Q9C009 403 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 FBXW11Q9UKB1 542 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 ZFP37Q9Y6Q3 630 aaPredicted RBP11.07□□□□□ -0.64
LIG1-209ENST00000596104 GPR179Q6PRD1 2367 aa11.07□□□□□ -0.64
LIG1-209ENST00000596104 SF3B1O75533 1304 aaKnown RBP eCLIP11.07□□□□□ -0.644e-6■■■■■ 34.5
LIG1-209ENST00000596104 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 PTGESO14684 152 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 LRRN2O75325 713 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 TADA2AO75478 443 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 CDKL5O76039 1030 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 BAG4O95429 457 aaKnown RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 CTDNEP1O95476 244 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 XBP1P17861 261 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 FSHRP23945 695 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 HOXA9P31269 272 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 GPC5P78333 572 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 NTHL1P78549 312 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 NR5A1Q13285 461 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 TUSC3Q13454 348 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 HSP90AA2PQ14568 343 aaPredicted RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 PARM1Q6UWI2 310 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 GRASPQ7Z6J2 395 aaPredicted RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 MAML2Q8IZL2 1156 aaPredicted RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 LNX1Q8TBB1 728 aaPredicted RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 POLR3FQ9H1D9 316 aaPredicted RBP11.06□□□□□ -0.64
LIG1-209ENST00000596104 PDRG1Q9NUG6 133 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 PARP2Q9UGN5 583 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 CDH7Q9ULB5 785 aa11.06□□□□□ -0.64
LIG1-209ENST00000596104 MED19A0JLT2 244 aaPredicted RBP11.05□□□□□ -0.64
LIG1-209ENST00000596104 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 WNT7AO00755 349 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 ADAM12O43184 909 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 PFKFB2O60825 505 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 KIF4AO95239 1232 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 HNRNPA1P09651 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
LIG1-209ENST00000596104 NAB2Q15742 525 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 ZC3H14Q6PJT7 736 aaKnown RBP11.05□□□□□ -0.64
LIG1-209ENST00000596104 KIAA2013Q8IYS2 634 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 PIGOQ8TEQ8 1089 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 FGF13Q92913 245 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 DDX23Q9BUQ8 820 aaKnown RBP11.05□□□□□ -0.64
LIG1-209ENST00000596104 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 FZD8Q9H461 694 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 TTC12Q9H892 705 aaPredicted RBP11.05□□□□□ -0.64
LIG1-209ENST00000596104 GPRC5CQ9NQ84 441 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 PCDHA12Q9UN75 941 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 DOCK8Q8NF50 2099 aa11.05□□□□□ -0.64
LIG1-209ENST00000596104 WDR87Q6ZQQ6 2873 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 A0A087WWV3 80 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 CASTOR2A6NHX0 329 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 USO1O60763 962 aaKnown RBP11.04□□□□□ -0.64
LIG1-209ENST00000596104 C8AP07357 584 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 POU2F2P09086 479 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
LIG1-209ENST00000596104 PSMD5Q16401 504 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 CALCRLQ16602 461 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 LIN9Q5TKA1 542 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 CDCA2Q69YH5 1023 aaPredicted RBP11.04□□□□□ -0.64
LIG1-209ENST00000596104 DCLK2Q8N568 766 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 SUMF1Q8NBK3 374 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 ITFG1Q8TB96 612 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 RUBCNQ92622 972 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 SHDQ96IW2 340 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 PRIMPOLQ96LW4 560 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
LIG1-209ENST00000596104 PRMT7Q9NVM4 692 aaPredicted RBP11.04□□□□□ -0.64
LIG1-209ENST00000596104 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
LIG1-209ENST00000596104 NCOR2Q9Y618 2525 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 KANSL1LA0AUZ9 987 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 CCL16O15467 120 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 RECQL4O94761 1208 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 XRCC6P12956 609 aaKnown RBP eCLIP11.03□□□□□ -0.64
LIG1-209ENST00000596104 IGFBP6P24592 240 aaPredicted RBP11.03□□□□□ -0.64
LIG1-209ENST00000596104 KRT2P35908 639 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 PRKCQQ04759 706 aa11.03□□□□□ -0.64
LIG1-209ENST00000596104 SNW1Q13573 536 aaKnown RBP11.03□□□□□ -0.64
LIG1-209ENST00000596104 RAB33AQ14088 237 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms