RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ESR2Q92731 530 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 KISS1RQ969F8 398 aaPredicted RBP8.74□□□□□ -1.01
VMP1-213ENST00000591877 CPVLQ9H3G5 476 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 ABHD16BQ9H3Z7 469 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 RNF41Q9H4P4 317 aaPredicted RBP8.74□□□□□ -1.01
VMP1-213ENST00000591877 CYP39A1Q9NYL5 469 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 ZSWIM5Q9P217 1185 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 SUSD2Q9UGT4 822 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 FAM184BQ9ULE4 1060 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 ATP11BQ9Y2G3 1177 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 LAMA3Q16787 3333 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 TRAV20A0A0B4J274 112 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 A0A1W2PQ45 241 aaPredicted RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 A0A1W2PQY0 241 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 B4E1Z4 1266 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 PLD2O14939 933 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 CTAGE5O15320 804 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 CYP26A1O43174 497 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 DUSP11O75319 330 aaKnown RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 GOLGA8HP0CJ92 632 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 PTGS1P23219 599 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 CHMLP26374 656 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 GBP1P32455 592 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 SOX4Q06945 474 aaPredicted RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 TTLL4Q14679 1199 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 NKG7Q16617 165 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 SV2CQ496J9 727 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 TMEM63BQ5T3F8 832 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 HEATR6Q6AI08 1181 aaKnown RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 RNF180Q86T96 592 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 DGKHQ86XP1 1220 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 TDHQ8IZJ6 230 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 CLEC4DQ8WXI8 215 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 KLHL25Q9H0H3 589 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 UPF3AQ9H1J1 476 aaKnown RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 PDLIM7Q9NR12 457 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 ARHGEF4Q9NR80 690 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 DDX56Q9NY93 547 aaKnown RBP8.73□□□□□ -1.01
VMP1-213ENST00000591877 CCPG1Q9ULG6 757 aa8.73□□□□□ -1.01
VMP1-213ENST00000591877 A0A1W2PQU0 124 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 TRIM43BA6NCK2 446 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 NFIBO00712 420 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 ITGB8P26012 769 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 CST5P28325 142 aaPredicted RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 ACLYP53396 1101 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 GJA9P57773 515 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 RNF4P78317 190 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 NKX3-2P78367 333 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 PTH1RQ03431 593 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 TLE2Q04725 743 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 BAATQ14032 418 aaPredicted RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 KCNA10Q16322 511 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 IMMTQ16891 758 aaKnown RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 LRIT3Q3SXY7 679 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 PRAMEF13Q5VWM6 474 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 TAPT1Q6NXT6 567 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 NSMFQ6X4W1 530 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 CYB5R4Q7L1T6 521 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 SCUBE1Q8IWY4 988 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 ENAHQ8N8S7 591 aaPredicted RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 MFSD2AQ8NA29 543 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 MORC4Q8TE76 937 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 TRIM43Q96BQ3 446 aaPredicted RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 IPO9Q96P70 1041 aaKnown RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 AARSD1Q9BTE6 412 aaKnown RBP8.72□□□□□ -1.01
VMP1-213ENST00000591877 DHRS4Q9BTZ2 278 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 UBA5Q9GZZ9 404 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 PDGFCQ9NRA1 345 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 TAF6LQ9Y6J9 622 aa8.72□□□□□ -1.01
VMP1-213ENST00000591877 ASB14A6NK59 587 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 MARCH6O60337 910 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 LRIG2O94898 1065 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 PAPLNO95428 1278 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 EPHX1P07099 455 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 CYP21A2P08686 494 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 FGFR1P11362 822 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 NT5C2P49902 561 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 SEC23AQ15436 765 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 CPSF6Q16630 551 aaKnown RBP eCLIP8.71□□□□□ -1.02
VMP1-213ENST00000591877 SLC30A10Q6XR72 485 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 IQCA1Q86XH1 822 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 C12orf50Q8NA57 414 aaPredicted RBP8.71□□□□□ -1.02
VMP1-213ENST00000591877 TBC1D5Q92609 795 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 BADQ92934 168 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 ISL2Q96A47 359 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 CDC6Q99741 560 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 MRPL4Q9BYD3 311 aaKnown RBP8.71□□□□□ -1.02
VMP1-213ENST00000591877 CTNNA3Q9UI47 895 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 MRPS23Q9Y3D9 190 aaKnown RBP8.71□□□□□ -1.02
VMP1-213ENST00000591877 TNKSO95271 1327 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms