RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 AIFM3Q96NN9 605 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
POLR2E-208ENST00000591709 OSBPL6Q9BZF3 934 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 SH3GLB2Q9NR46 395 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 FNIP2Q9P278 1114 aa18.85■□□□□ 0.61
POLR2E-208ENST00000591709 NR1I2O75469 434 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 ERLIN2O94905 339 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 NPEPPSP55786 919 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 LPAL2Q16609 132 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 ZBTB41Q5SVQ8 909 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 NECAB1Q8N987 351 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 CNNM3Q8NE01 707 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
POLR2E-208ENST00000591709 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 NELL1Q92832 810 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 TMEM143Q96AN5 459 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 COLEC11Q9BWP8 271 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 PRMT8Q9NR22 394 aaPredicted RBP18.84■□□□□ 0.61
POLR2E-208ENST00000591709 FBXW11Q9UKB1 542 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 POLIQ9UNA4 740 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 BAHCC1Q9P281 2608 aa18.84■□□□□ 0.61
POLR2E-208ENST00000591709 CCL16O15467 120 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 LARGE1O95461 756 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 TDP2O95551 362 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 C1RP00736 705 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 PFKPQ01813 784 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 SPEM2Q0P670 501 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 ME3Q16798 604 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 PPM1JQ5JR12 505 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 LIN9Q5TKA1 542 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 ITFG1Q8TB96 612 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 PRPF31Q8WWY3 499 aaKnown RBP18.83■□□□□ 0.6
POLR2E-208ENST00000591709 CPB2Q96IY4 423 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 CACNG4Q9UBN1 327 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 ADAM28Q9UKQ2 775 aa18.83■□□□□ 0.6
POLR2E-208ENST00000591709 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.83■□□□□ 0.6
POLR2E-208ENST00000591709 TBC1D4O60343 1298 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 C8AP07357 584 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 USP11P51784 963 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 PSMC5P62195 406 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 CREMQ03060 361 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 LAMTOR4Q0VGL1 99 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 RTP2Q5QGT7 225 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 PPM1LQ5SGD2 360 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 RSPO2Q6UXX9 243 aaPredicted RBP18.82■□□□□ 0.6
POLR2E-208ENST00000591709 ZNF579Q8NAF0 562 aaKnown RBP18.82■□□□□ 0.6
POLR2E-208ENST00000591709 RNF149Q8NC42 400 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 TBCKQ8TEA7 893 aa18.82■□□□□ 0.6
POLR2E-208ENST00000591709 NXF3Q9H4D5 531 aaKnown RBP18.82■□□□□ 0.6
POLR2E-208ENST00000591709 TSPAN1O60635 241 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 CTDNEP1O95476 244 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 KCNA4P22459 653 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 Q4G0T1 1027 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 HASPINQ8TF76 798 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 ING5Q8WYH8 240 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 CLDN23Q96B33 292 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 CEP170P1Q96L14 293 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 C22orf23Q9BZE7 217 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 PCDHA4Q9UN74 947 aa18.81■□□□□ 0.6
POLR2E-208ENST00000591709 STK36Q9NRP7 1315 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 FAM208BQ5VWN6 2430 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 SDK1Q7Z5N4 2213 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 HNRNPA1P09651 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
POLR2E-208ENST00000591709 MTAPQ13126 283 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 NOTUMQ6P988 496 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 NPAS3Q8IXF0 933 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 GTF3C6Q969F1 213 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
POLR2E-208ENST00000591709 DHX33Q9H6R0 707 aaKnown RBP18.8■□□□□ 0.6
POLR2E-208ENST00000591709 HCFC1R1Q9NWW0 138 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 ORC3Q9UBD5 711 aaPredicted RBP18.8■□□□□ 0.6
POLR2E-208ENST00000591709 RALYQ9UKM9 306 aaKnown RBP18.8■□□□□ 0.6
POLR2E-208ENST00000591709 RAB23Q9ULC3 237 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 KCNJ14Q9UNX9 436 aa18.8■□□□□ 0.6
POLR2E-208ENST00000591709 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.6
POLR2E-208ENST00000591709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.79■□□□□ 0.6
POLR2E-208ENST00000591709 EML1O00423 815 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 NCAM2O15394 837 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 AKAP5P24588 427 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 RPS9P46781 194 aaKnown RBP18.79■□□□□ 0.6
POLR2E-208ENST00000591709 EMC2Q15006 297 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 FERMT3Q86UX7 667 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 BLIDQ8IZY5 108 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 GSTCDQ8NEC7 633 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 SLC7A14Q8TBB6 771 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 ETNPPLQ8TBG4 499 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 NETO1Q8TDF5 533 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 CLSTN3Q9BQT9 956 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 HEBP1Q9NRV9 189 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 WRAP73Q9P2S5 460 aaPredicted RBP18.79■□□□□ 0.6
POLR2E-208ENST00000591709 GIT1Q9Y2X7 761 aa18.79■□□□□ 0.6
POLR2E-208ENST00000591709 KIF26AQ9ULI4 1882 aaPredicted RBP18.79■□□□□ 0.6
POLR2E-208ENST00000591709 SLC30A4O14863 429 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms